Gene Information

Name : ECUMN_0137 (ECUMN_0137)
Accession : YP_002410915.1
Strain : Escherichia coli UMN026
Genome accession: NC_011751
Putative virulence/resistance : Virulence
Product : putative chaperone protein EcpD
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 159493 - 160224 bp
Length : 732 bp
Strand : -
Note : Evidence 1b : Function experimentally demonstrated in the studied species; PubMedId : 8102362, 8202364, 9278503; Product type f : factor

DNA sequence : 
TTGTTAAATAAAAAGAATATTGTCGCATTATGTGTTGCCAGTAGTATGGCATTTAGTATGCCTGTTATGGCTGATATTGT
TATTTCCGGTACACGCGTCATTTATAAAAGTGATCAAAAAAGCGTTAGCGTACGCCTGGAGAATAAAGGCAATAGCCATC
TGTTAGTACAAAGCTGGCTGGATACCGGTGACGATAACGCTGAGCCGGGAAGCATTAATGTACCATTTACGGCAACACCT
CCCGTTTCACGTATTGATGCTAAACGCGGTCAAACCATCAAATTGATGTATACCGGCAGCACCGTACTCCCCAGCGACAA
AGAAAGCGTATTCTGGTTTAACGTGCTGGAAGTGCCCCCAAAACCAGATGCTTCAAAAGTAGAGAATCAGAGCCTGTTAC
AACTGGCTTTCCGTACCCGTATCAAGCTGTTCTATCGTCCGGCAGGATTAAACGGTAACCCGTCTGAAGCACCATTAGCC
CTGAAATGGAAATGGGCTGAAGGGAAGTCTGGCCTGAGTGTATATAACCCAACATCTTATTACGTCTCTTTCAACAGTGC
AGAGTTAATCGCTGGCGGTAAGTCGAACCCGCTCAATGTAAAAATGGTTGCACCGAAAAGCGAAGAGATTTTCACCATAA
GCGGTTCAGGCGGGAAAGCAACGTCAGGAAAGGTACATTTCTCCGCGATTAATGATTTTGGCGGCGCAATTGAAGGCGAT
GTCAATTTGTAA

Protein sequence : 
MLNKKNIVALCVASSMAFSMPVMADIVISGTRVIYKSDQKSVSVRLENKGNSHLLVQSWLDTGDDNAEPGSINVPFTATP
PVSRIDAKRGQTIKLMYTGSTVLPSDKESVFWFNVLEVPPKPDASKVENQSLLQLAFRTRIKLFYRPAGLNGNPSEAPLA
LKWKWAEGKSGLSVYNPTSYYVSFNSAELIAGGKSNPLNVKMVAPKSEEIFTISGSGGKATSGKVHFSAINDFGGAIEGD
VNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ecpD1 AAO49832.1 pilin chaperone ecpD1 Not tested SPI-3 Protein 5e-62 61
unnamed CAD33727.1 putative F17-like fimbrial chaperone Virulence PAI I 536 Protein 3e-40 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECUMN_0137 YP_002410915.1 putative chaperone protein EcpD VFG1145 Protein 1e-38 42
ECUMN_0137 YP_002410915.1 putative chaperone protein EcpD VFG1468 Protein 2e-40 42
ECUMN_0137 YP_002410915.1 putative chaperone protein EcpD VFG0007 Protein 3e-41 41