Gene Information

Name : papI (ECIAI39_4584)
Accession : YP_002410448.1
Strain : Escherichia coli IAI39
Genome accession: NC_011750
Putative virulence/resistance : Virulence
Product : pap operon regulatory protein PapI
Function : -
COG functional category : K : Transcription
COG ID : COG2345
EC number : -
Position : 4784680 - 4784913 bp
Length : 234 bp
Strand : -
Note : Evidence 1b : Function experimentally demonstrated in the studied species; PubMedId : 2868893, 1357526; Product type r : regulator

DNA sequence :
ATGAGTGAATATATGAAGAATGAAATACTGGAATTTCTGAACAGGCATGATGGAGGGAAAACGGCAGAAATTGCGGAGGC
GCTGGCGGTAACGGATTACCAGGCCCGCTATTACCTGTTATTACTGGAAAAAGCAGGTATGGTTCAGCGCTCACCATTAA
GACGGGGCATGGCAACATACTGGCTTCTGAAAGGAGAGAAGCAGGCGGGGCAGAGTTGTTCTTCCACAACTTAA

Protein sequence :
MSEYMKNEILEFLNRHDGGKTAEIAEALAVTDYQARYYLLLLEKAGMVQRSPLRRGMATYWLLKGEKQAGQSCSSTT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
papI NP_755468.1 PapI protein Virulence PAI I CFT073 Protein 2e-30 99
papI YP_002414019.1 pap operon regulatory protein PapI Not tested Not named Protein 2e-30 99
papI AAL67419.1 PapI Virulence PAI II CFT073 Protein 2e-30 98
fooI AAT48694.1 fimbrial regulatory protein Virulence PAI I 4787 Protein 2e-30 98
papI_2 NP_757037.1 PapI protein Virulence PAI II CFT073 Protein 3e-28 98
prfI CAD42033.1 PrfI protein Virulence PAI II 536 Protein 3e-29 94
sfaC CAC16949.1 SfaC protein Virulence PAI III 536 Protein 5e-26 88
afaF AAK16195.1 AfaF Virulence PAI-I AL862 Protein 8e-10 47
afaF ADD91749.1 putative transcriptional regulator AfaF-VIII Not tested PAI-I AL862 Protein 8e-10 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
papI YP_002410448.1 pap operon regulatory protein PapI VFG0880 Protein 7e-31 99
papI YP_002410448.1 pap operon regulatory protein PapI VFG0891 Protein 8e-29 98
papI YP_002410448.1 pap operon regulatory protein PapI VFG1552 Protein 1e-29 94
papI YP_002410448.1 pap operon regulatory protein PapI VFG1640 Protein 2e-26 88