Gene Information

Name : ECIAI39_4575 (ECIAI39_4575)
Accession : YP_002410439.1
Strain : Escherichia coli IAI39
Genome accession: NC_011750
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4776837 - 4777655 bp
Length : 819 bp
Strand : -
Note : Evidence 4 : Homologs of previously reported genes of unknown function

DNA sequence :
ATGCAATTAGCCAGTCGTTTTGGTCATGTAAATCAGATCCGTCGGGAGCGCCCACTGACACGCGAAGAACTGATGTACCA
CGTCCCGAGTATTTTTGGAGAAGACCGGCACACCTCCCGCAGTGAACGGTATGCGTACATTCCCACCATCACCGTCCTGG
AAAATCTGCAGCGGGAAGGCTTTCAGCCGTTCTTCGCCTGCCAGACACGTGTGCGCGACCAGAGCCGCCGGGAATATACC
AAACATATGCTGCGTCTGCGGCGGGCCGGACAGATAACCGGTCAGCATGTACCTGAAATTATTCTGCTCAACTCCCATGA
CGGTTCATCCAGCTACCAGATGTTACCCGGATATTTTCGTGCCATCTGCACCAATGGCCTGGTCTGCGGTCAGTCGCTGG
GAGAAGTCCGGGTGCCCCACCGGGGAAACGTGGTGGACAGGGTGATTGAAGGTGCTTACGAGGTGGTGGGCGTTTTTGAC
CGGATTGAGGAAAAGCGTGATGCCATGCAGTCGCTGGTCCTGCCGCCACCGGCACGCCAGGCGCTGGCACAGGCGGCGCT
GACTTACCGTTATGGTGACGAACATCAGCCCGTCACCACCGCCGACATTCTGACACCACGACGCCGGGAGGATTACGGTA
AGGACCTGTGGAGTGCTTATCAGACCATTCAGGAGAATATGCTGAAAGGCGGAATTTCCGGTCGCAGTGCCAGAGGGAAA
CGTATCCACACCCATGCCATTCACAGCATCGACACCGATATTAAGCTCAACCGCGCATTGTGGGTGATGGCAGAAACGCT
GCTGGAGAGCCTGCGCTGA

Protein sequence :
MQLASRFGHVNQIRRERPLTREELMYHVPSIFGEDRHTSRSERYAYIPTITVLENLQREGFQPFFACQTRVRDQSRREYT
KHMLRLRRAGQITGQHVPEIILLNSHDGSSSYQMLPGYFRAICTNGLVCGQSLGEVRVPHRGNVVDRVIEGAYEVVGVFD
RIEEKRDAMQSLVLPPPARQALAQAALTYRYGDEHQPVTTADILTPRRREDYGKDLWSAYQTIQENMLKGGISGRSARGK
RIHTHAIHSIDTDIKLNRALWVMAETLLESLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42096.1 hypothetical protein Not tested PAI II 536 Protein 3e-118 99
z1215 CAD33785.1 Z1215 protein Not tested PAI I 536 Protein 2e-119 99
yafZ CAE85199.1 YafZ protein Not tested PAI V 536 Protein 1e-117 97
Z1215 NP_286750.1 hypothetical protein Not tested TAI Protein 3e-114 96
Z1655 NP_287158.1 hypothetical protein Not tested TAI Protein 3e-114 96
unnamed CAD66201.1 hypothetical protein Not tested PAI III 536 Protein 6e-109 91
yafZ YP_854321.1 hypothetical protein Not tested PAI I APEC-O1 Protein 6e-110 91
unnamed CAI43843.1 hypothetical protein Not tested LEE Protein 1e-109 91
aec71 AAW51754.1 Aec71 Not tested AGI-3 Protein 1e-109 91
yafZ ADD91704.1 YafZ Not tested PAI-I AL862 Protein 1e-109 91
ORF_47 AAZ04456.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 5e-110 91
ECO103_3587 YP_003223444.1 hypothetical protein Not tested LEE Protein 1e-109 91
c5156 NP_757004.1 hypothetical protein Not tested PAI II CFT073 Protein 7e-110 90
S3199 NP_838482.1 hypothetical protein Not tested SHI-1 Protein 3e-110 89
SF2994 NP_708768.1 hypothetical protein Not tested SHI-1 Protein 3e-110 89
ORF SG86 AAN62307.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 1e-72 55
ORF C80 AAN62174.1 conserved hypothetical protein; associated with oriT region on plasmids Not tested PAGI-2(C) Protein 1e-71 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECIAI39_4575 YP_002410439.1 hypothetical protein VFG1615 Protein 2e-118 99
ECIAI39_4575 YP_002410439.1 hypothetical protein VFG1526 Protein 1e-119 99
ECIAI39_4575 YP_002410439.1 hypothetical protein VFG1676 Protein 3e-109 91
ECIAI39_4575 YP_002410439.1 hypothetical protein VFG0658 Protein 1e-110 89