Gene Information

Name : ECIAI39_4567 (ECIAI39_4567)
Accession : YP_002410432.1
Strain : Escherichia coli IAI39
Genome accession: NC_011750
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4772944 - 4773789 bp
Length : 846 bp
Strand : -
Note : Evidence 4 : Homologs of previously reported genes of unknown function; PubMedId : 9987116

DNA sequence :
ATGTCAGACATCACAATCTCCCGTCCGGAAGTGGTCACCGGGCATACGGACGTTATCTGCTCCACCAGTATCCGACACGT
TGTGACGGTACGGAATGCAGCACTGCAACAAACCGAAACGCTTATCCGGCAACTGGCAGAAATCTCAGTGCTGACAGCAG
GCATTGGCGGCAAAACCGCCCTGGACTGGGCGATGAAACAGAATTTTCGCTGTGGCTGCTGGCTGATGGAAAAACCGGAA
GCAGCAATGAAAGCCATCACCCGCAATCTCGATCGAGAAATCTGGCGTGACCTGATGCAACGTTCAGGGATGCTTTCCTT
AATGGATGCACAGGCCCGTGATACATGGTACCGATCACTGGAATATGATAATTTTCCGGAAATCAGTGAAGCGAACATTC
TGAGCACATTTGAACAACTGCACCAGAACATAGATGAAGTGTTTGAGCGAGGGGTGATCAACGTCTTCAGGGGACTGAAC
TGGAATTACAAAACTAATTGCCCCTGTAAATTTGGCAGTAAAATTATCGTCAACAATCTGGTGAGATGGGACCGGTGGGG
ATTTCATCTTATCACCGGGCAACAGGCAGATCGACTTGCCGACCTGGAAAGAATGCTGTATTTGTTCAGCGGCAAACCGA
TTCCTGACAACCGGGAAAACATAACCATTCATCTGGATGATCACATCCACTCAGTTCAGGGTAAAGCGTGCTATGAAGAT
GAGATGTTCAGCATCAGATACTTTAAGAAGGGCTCCGCGCACATCACGTTCAGGAAACCAGAGCTGGTTGACAGACTGAA
TGATATTATTGCGAAATACTATCCGGAAACCTTATCGCCCGTTTAA

Protein sequence :
MSDITISRPEVVTGHTDVICSTSIRHVVTVRNAALQQTETLIRQLAEISVLTAGIGGKTALDWAMKQNFRCGCWLMEKPE
AAMKAITRNLDREIWRDLMQRSGMLSLMDAQARDTWYRSLEYDNFPEISEANILSTFEQLHQNIDEVFERGVINVFRGLN
WNYKTNCPCKFGSKIIVNNLVRWDRWGFHLITGQQADRLADLERMLYLFSGKPIPDNRENITIHLDDHIHSVQGKACYED
EMFSIRYFKKGSAHITFRKPELVDRLNDIIAKYYPETLSPV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF_49 AAZ04463.1 hypothetical protein Not tested PAI I APEC-O1 Protein 1e-131 100
APECO1_3484 YP_854327.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-131 100
aec79 AAW51762.1 Aec79 Not tested AGI-3 Protein 7e-123 92
Z1226 NP_286760.1 hypothetical protein Not tested TAI Protein 3e-121 90
Z1664 NP_287166.1 hypothetical protein Not tested TAI Protein 3e-121 90
z1226 CAD33792.1 Z1226 protein Not tested PAI I 536 Protein 4e-121 89
unnamed AAL57572.1 unknown Not tested LEE Protein 3e-119 89
unnamed CAI43906.1 hypothetical protein Not tested LEE Protein 6e-118 89
ECO111_3781 YP_003236116.1 hypothetical protein Not tested LEE Protein 3e-118 87
unnamed CAE85207.1 hypothetical protein Not tested PAI V 536 Protein 2e-117 86
ECO103_3595 YP_003223452.1 hypothetical protein Not tested LEE Protein 2e-117 85
unnamed CAD66210.1 hypothetical protein Not tested PAI III 536 Protein 4e-108 85
S3207 NP_838489.1 hypothetical protein Not tested SHI-1 Protein 3e-116 84
unnamed AAK00485.1 unknown Not tested SHI-1 Protein 2e-116 84
SF3002 NP_708776.1 hypothetical protein Not tested SHI-1 Protein 3e-116 84

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECIAI39_4567 YP_002410432.1 hypothetical protein VFG1533 Protein 3e-121 89
ECIAI39_4567 YP_002410432.1 hypothetical protein VFG1685 Protein 2e-108 85
ECIAI39_4567 YP_002410432.1 hypothetical protein VFG0666 Protein 1e-116 84