|
Name : lpfD (ECIAI39_4329) Accession : YP_002410204.1 Strain : Escherichia coli IAI39 Genome accession: NC_011750 Putative virulence/resistance : Unknown Product : putative fimbrial protein LpfD; putative adhesin Function : - COG functional category : N : Cell motility COG ID : COG3539 EC number : - Position : 4510026 - 4511096 bp Length : 1071 bp Strand : - Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 12438351, 7721701, 16128397; Product type ps : putative structure DNA sequence : ATGAACAAGTATATTATACAGTGGTGCTTTACTGTTTTTATCTTCTCCTTTAGTGGTGCAACATTTGCGGCCCCAAAAGG TATCTGCACCTCAGATAATGGGGCCTTTCATAGCACACTTGATTTTTCCGGCTATCTGATTACGGCAGACGAGAACAGAG TGGGAGAGACCTTTAATAAAACCGTGACAAATGGGGACTCTTATCCTGCTCACTGCCATTGTGATACAGGGAAAGTGGGG GAGTTTCCTTATATTTACTATACAGCGAGAATAAACGAGGCCTTAAGTTATGCGGGTGTTCGTTCTAATGTAAACTACTT TAATTTGAATCCTAATCTGGATGTTGGAATATCGATAGACCTTCTCGGTGTAGGATACATTAATGCACCTTTTGAATACC ATGCTAACAGGCCTACTGGAGGTTCATATAAATGTAGTCGCACGGACCCATTAAGTATTTCCAGTGGTGCAAAAGCAATA ATTTATTTTTATATTAAGAAGACTTTTGCTGGAAAGTTAATTGTCCCTGAAACGCTCGTGGCAAAATTGTACGGAACTAT AAGCCGTGACACTCCGGTTGATTACTCACAACCTATGGCGGATGTTTATATTCGTGGCGATATCACTGCACCGCAAAGCT GTGAAATTAACAGTTTAAGACCCATTAATTTTGATTTTAAAGAAATTCCTGCAGCAGATTTTTCTTCGGTAGCTGGAAGT ACCGTGACAACGCATAAAATTACCAAAACCGTCACCATTGAGTGTGAAAATTTAGGAATACTAAATACTGATGATATAAG TACCTCTTTTTATGCTACCGAACCCAGTACTGACAACTCAATGGTCGTGACATCAAACCCGAACGTTGGGATAAAAATTT ATGATAAAAATAATAAGGAAATCAACGTTAACGGTGGTGAACTGCCGACAGATATGGGTAAATCAAACGTCTTTGGTGAA AAAGCCGGTAGCGTCACTTTTTCTGCTGCTCCTGCAAGCCTCACGGGGGCTCGCCCCGCGCCAGGAACATTTACCGCGAC TGCAACGATAACAATTGAGATTGTACGCTAA Protein sequence : MNKYIIQWCFTVFIFSFSGATFAAPKGICTSDNGAFHSTLDFSGYLITADENRVGETFNKTVTNGDSYPAHCHCDTGKVG EFPYIYYTARINEALSYAGVRSNVNYFNLNPNLDVGISIDLLGVGYINAPFEYHANRPTGGSYKCSRTDPLSISSGAKAI IYFYIKKTFAGKLIVPETLVAKLYGTISRDTPVDYSQPMADVYIRGDITAPQSCEINSLRPINFDFKEIPAADFSSVAGS TVTTHKITKTVTIECENLGILNTDDISTSFYATEPSTDNSMVVTSNPNVGIKIYDKNNKEINVNGGELPTDMGKSNVFGE KAGSVTFSAAPASLTGARPAPGTFTATATITIEIVR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lpfD | YP_006098364.1 | putative fimbrial adhesin | Not tested | Tn2411 | Protein | 8e-145 | 99 |
