Gene Information

Name : ECIAI39_4200 (ECIAI39_4200)
Accession : YP_002410076.1
Strain : Escherichia coli IAI39
Genome accession: NC_011750
Putative virulence/resistance : Unknown
Product : transposase ORF B (fragment), IS629
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 4375252 - 4375698 bp
Length : 447 bp
Strand : +
Note : Evidence 7 : Gene remnant; Product type pe : putative enzyme

DNA sequence :
GTGGCGTTCATCATTGATGTGTTTGCCGGATACATCGTGGGGGGGCGGGTATCATCGTCCATGGAAACGACATTCGTGCT
GGATGCGCTGGAGCAGGCGTTGTGGGCCCATCGTCCGTCCGGCACCATCCATCACAGCGATAAAGGCTCTCAGTATGTGT
CACTGGCCTATACGGAGCGATTAAAAGAAGCAAAACTGCTGGCATCAACAGGAAGTACAGGCGACTCGTATGACAACGCG
ATGGCGGAGAGCATCAATGGTCTTTACAAAGCGGAGGTAATACACCGTAAGAGCTGGAAAAACCGTGCAGAAGTGGAACT
GTCCACACTCACGTGGGTGGACTGGTATAACAATCGACGATTGCTGGGAAGGCTGAGGCATACTCCTCCGGCAGAAGCAG
AAAAAGCGTATTATGCTTCCATCGGAAATGATGAGCTGGCAGCCTGA

Protein sequence :
MAFIIDVFAGYIVGGRVSSSMETTFVLDALEQALWAHRPSGTIHHSDKGSQYVSLAYTERLKEAKLLASTGSTGDSYDNA
MAESINGLYKAEVIHRKSWKNRAEVELSTLTWVDWYNNRRLLGRLRHTPPAEAEKAYYASIGNDELAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT48693.1 unknown Not tested PAI I 4787 Protein 4e-51 96
r15 AAC61720.1 putative transposase R15 Not tested PAI I CFT073 Protein 7e-51 94
c3594 NP_755469.1 transposase Not tested PAI I CFT073 Protein 4e-58 93
tnpC AAD44736.1 TnpC Not tested SHI-2 Protein 5e-58 93

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECIAI39_4200 YP_002410076.1 transposase ORF B (fragment), IS629 VFG1715 Protein 1e-58 93