Gene Information

Name : sgbU (ECIAI39_4094)
Accession : YP_002409977.1
Strain : Escherichia coli IAI39
Genome accession: NC_011750
Putative virulence/resistance : Unknown
Product : putative L-xylulose 5-phosphate 3-epimerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3623
EC number : -
Position : 4264144 - 4265004 bp
Length : 861 bp
Strand : +
Note : L-xylulose 5-phosphate 3-epimerase activity not yet demonstrated; may be involved in the utilization of 2,3-diketo-L-gulonate

DNA sequence :
GTGCGTAATCATCCGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCAAA
AAGCTGTGGCTTTGATTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCTCACGCCTTGACTGGAGCGCCGCAC
AACGTGCTTCGCTGGTCACTGCGATGATCGAAACGGGTGTTGCCATTCCGTCAATGTGCCTGTCTGCCCATCGTCGTTTT
CCCTTTGGCAGCCGGGACGAGGCAGTGCGCGAACGGGCGCGGGAAATCATGAGTAAAGCGATTCGCCTGGCGCGCGATCT
CGGCATTCGCACCATCCAGCTGGCAGGTTATGACGTCTATTACGAAGACCACGACGAAGGCACCCAACAACGTTTTGCTG
AAGGGCTGGCGTGGGCAGTCGAACAGGCGGCGGCATCACAAGTTATGCTGGCGGTGGAGATTATGGATACCGCGTTTATG
AACTCCATCAGCAAATGGAAAAAATGGGACGAGATGCTCGCCTCGCCGTGGTTCACCGTCTACCCGGACGTCGGCAACCT
CAGCGCCTGGGGCAATGATGTTCCCGCCGAACTGAAACTGGGCATTGACCGTATCGCCGCGATCCACCTGAAAGACACCC
AGCCAGTGACCGAGCAAAGCCCCGGACAGTTCCGTGATGTGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTC
AAAACGCTGCATGAACTGAACTATCGCGGATCATTTCTGATTGAGATGTGGACCGAAAAAGCCAAAGAGCCGGTGCTGGA
GATTATTCAGGCGCGGCGCTGGATTGAAGCGCGTATGCAGGAGGCCGGATTTATATGTTAG

Protein sequence :
MRNHPLGIYEKALAKDLSWPERLVLAKSCGFDFVEMSVDETDERLSRLDWSAAQRASLVTAMIETGVAIPSMCLSAHRRF
PFGSRDEAVRERAREIMSKAIRLARDLGIRTIQLAGYDVYYEDHDEGTQQRFAEGLAWAVEQAAASQVMLAVEIMDTAFM
NSISKWKKWDEMLASPWFTVYPDVGNLSAWGNDVPAELKLGIDRIAAIHLKDTQPVTEQSPGQFRDVPFGEGCVDFVGIF
KTLHELNYRGSFLIEMWTEKAKEPVLEIIQARRWIEARMQEAGFIC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
M5005_Spy_0152 YP_281516.1 L-xylulose 5-phosphate 3-epimerase Not tested Not named Protein 4e-63 55