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Name : yghJ (ECIAI39_3460) Accession : YP_002409370.1 Strain : Escherichia coli IAI39 Genome accession: NC_011750 Putative virulence/resistance : Virulence Product : inner membrane lipoprotein Function : - COG functional category : - COG ID : - EC number : - Position : 3612166 - 3616740 bp Length : 4575 bp Strand : - Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 1644747; Product type lp : lipoprotein DNA sequence : TTGTCACTTGCGTTATTAATGAATAAGAAATTTAAATATAAGAAATCGCTTTTAGCGGCTATTTTGAGTGCAACCCTGTT AGCCGGTTGTGATGGCGGTGGCTCCGGATCTTCCTCCGATACGCCGCCTGTAGATTCTGGAACAGGGTCTTTGCCGGAAG TGAAACCTGATCCAACACCAAACCCGGAGCCGACGCCTGAGCCAACGCCGGACCCAGAACCTACGCCGGAACCGACACCT GATCCTGAGCCAGAACCGGAGCCAGAACCTGTTCCTACGAAAACGGGTTATCTGACCCTGGGCGGAAGCCAGCGGGTAAC TGGTGCTACTTGTAATGGTGAATCCAGCGATGGCTTTACATTTACACCTGGTGAGGACGTTACTTGCGTGGCGGGTAACA CGACAATTGCTACCTTCGACACCCAGTCAGAAGCTGCGCGTAGCCTGCGTGCGGTTGAAAAAGTGTCGTTTAGTCTTGAG GACGCGCAAGAACTGGCAGCTTCCGATGACAAGAAAAGCAATGCGGTTTCGCTGGTAACGTCCAGTAACAGCTGTCCGGC GAATACAGAACAGGTTTGCCTGACGTTCTCCTCAGTGATCGAGAGTAAACGTTTCGACTCGCTGTATAAGCAAATCGATC TGGCACCGGAAGAGTTCAAAAAGCTGGTCAATGAAGAGGTGGAAAACAATGCCGCGACCGATAAAGCGCCATCCACTCAT ACTTCACCGGTTGTGCCCGTCACCACGCCGGGAACAAAACCGGATCTGAACGCTTCCTTCGTGTCGGCTAACGCGGAACA GTTTTATCAGTATCAACCCACTGAAATCATTCTCTCCGAAGGCCGACTGGTAGATAGCATGGGCAATGGTGTGGTTGGCG TAAATTACTACACCAGCTCAGGCCGTGGCGTAACTGGCGAAAACGGCAAATTCAACTTCAGCTGGGGCGAAACCATCTCC TTTGGTATCGACACCTTTGAACTGGGCTCAGTGCGCGGCAATAAGTCGACCATTGCGTTGACTGAACTGGGTGACGAAGT TCGCGGCGCGAATATTGATCAGCTTATTCATCGTTACTCCCAGGCCGGAAAAAATGATGAGCGTGAAGTGCCGGACGTAG TGCGCAAGGTCTTTGCCGAGTATCCCAACGTAATCAACGAGATTATCAATCTCTCGTTATCCAATGGCGAGGCGTTGAGC GAAGGCGATCAAACCTTTGAGCGGACAAACGAATTTCTTGAGCAGTTTGAATCCGGGCAGGCTAAAGAGATTGATACGGC GATTTGTGACTCCCTTGGGGGCTGCAACTCTCAGCGTTGGTTCTCGTTGACAGCACGCAATGTTAACGAAGGTCAGATTC AGGGCGTTATCAACAAGCTGTGGGGTGTGGATAAAGATTACAAATCAGTGACGAAATTCCACGTCTTCCATGACTCTACC AACTTCTATGGCAGTACCGGTAATGCGCGCGGTCAGGCAGTGGTGAATATCTCCAACGCGGCCTTCCCGATTCTGATGGC GCGTAATGATAAAAACTACTGGCTGGCGTTTGGCGAAAAACGCGCCTGGGATAAAAACGAGCTGGCGTACATTACGGAAG CGCCTTCTCTCGTTGAGCCGGAAAACGTTACGCGCGATACCGCCACCTTTAACCTGCCGTTTATTTCGCTGGGGCAAGTC GGTGAGGGCAAACTGATGGTTATCGGTAACCCGCACTACAACAGCATTTTGCGTTGTCCGAACGGTTACAGCTGGGAAGG CGGTGTTGATAAAAACGGTCAGTGTACGCGTAACAGTGATTCTAATGATATGAAGCACTTTATGCAGAACGTGTTGCGCT ATCTGTCCGACGATAAATGGACGCCGGACGCGAAAGCCAGCATGACCGTAGGCACCAACCTGGATACTGTCTATTTCAAA CGTCATGGTCAGGTTACAGGAAACAGCGCTGAGTTCGGCTTTCATCCGGATTTTGCGGGTATCTCTGTTGAGCATTTAAG TAGCTATGGCGATCTCGACCCGCAGGAAATGCCGCTGCTGATCCTCAACGGCTTTGAGTATGTGACTCAGGTTGGTAACG ATCCTTATGCAATCCCGCTGCGAGCAGATACCAGCAAACCGAAGCTGACTCAGCAGGATGTGACCGATCTGATCGCCTAT CTGAACAAAGGTGGATCGGTGCTGATCATGGAAAACGTGATGAGCAATCTTAAGGAAGAGAGCGCGTCTGGCTTTGTACG TCTGCTTGATGCCGCAGGTCTGTCGATGGCACTGAACAAGTCGGTAGTAAATAACGATCCGCAAGGGTATCCGAACCGCG TTCGTCAGCAGCGCGCAACGGGCATTTGGGTCTATGAACGTTATCCTGCCGTAGATGGTGCGCTGCCGTACACCATCGAT AGTAAGACAGGGGAAGTTAAGTGGAAATATCAGGTAGAAAACAAACCTGATGACAAACCGAAGCTGGAAGTTGCCAGCTG GCTGGAAGATGTAGATGGCAAACAGGAAACGCGTTATGCCTTTATTGATGAGGCCGATCATAAAACAGAGGATTCTCTGA AGGCTGCGAAGGCAAAAATCTTTGAGAAGTTTCCTGGATTAAAGGAGTGTAAGGACCCAACTTACCACTACGAGGTCAAC TGTCTGGAATATCGTCCTGGCACGGGGGTTCCGGTTACTGGTGGCATGTATGTTCCACAGTATACGCAACTAAGCCTTAA CGCCGACACGGCAAAAGCGATGGTGCAGGCTGCGGATTTAGGCACCAACATTCAGCGTCTGTATCAGCATGAGCTCTACT TCCGGACCAATGGTCGCAAAGGTGAGCGTCTGAGCAGCGTCGATCTGGAACGTCTGTACCAGAACATGTCGGTCTGGCTG TGGAATAAAATTGAATATCGCTATGAAAACGACAAGGATGACGAGCTGGGCTTTAAAACGTTCACCGAGTTCCTGAACTG CTACGCCAACGATGCCTATACTGGCGGCACGCAGTGTTCTGATGAGCTGAAAAAATCGCTGGTCGATAACAACATGATCT ACGGCGAGAAGAGCGTTAATAAAGCGGGCATGATGAACCCGAGCTATCCGCTCAACTATATGGAAAAACCGCTGACGCGC CTGATGCTGGGTCGTTCCTGGTGGGATCTAAACATCAAAGTTGATGTCGAGAAGTATCCGGGAGCGGTATCGGCAGAAGG TGAGAAGGTTACTGAAACCATCAGCCTGTACTCCAATCCGACCAAATGGTTTGCGGGTAACATGCAGTCTACTGGCCTGT GGGCTCCGGCTCAGAAAGAGGTCACCATTGAGTCTTCTGCATCAGTTCCTGTGACTGTCACCGTGGCGCTGGCCGACGAT CTGACCGGACGCGAGAAGCATGAAGTCGCGCTGAACCGTCCGCCAAAAGTGACGAAAACCTATGATCTGAAAGCCAATGA TAAGGTGACCTTCAAGGTGCCTTACGGTGGTCTGATTTATATCAAGGGCAACAGCCCAAAGAATGAGTCAGCCGAATTCA CCTTTACTGGTGTGGTAAAAGCGCCGTTCTATAAAGACGGCGAATGGAAAAACGCTCTGAACTCCCCTGCGCCGCTGGGC GAGCTGGAATCAGACGCTTTCGTTTATACCACGCCGAAGAAGAACCTTGAGGCTAGCAATTTCACTGGTGGTGTAGCAGA ATTCGCTAAAGATCTGGATACCTTTGCCAGCTCGATGAATGACTTCTACGGTCGTAATGATGAAGACGGTAAGCACCGGA TGTTTACCTATAAAAACTTGACGGGGCACAAGCATCGTTTCACCAACGATGTGCAGATCTCCATCGGTGATGCGCACTCG GGTTATCCGGTAATGAACAGCAGCTTCTCGACGAACAGCACCACGCTGCCGACGACGCCGCTGAACGACTGGTTGATCTG GCACGAAGTAGGGCACAACGCCGCCGAAACGCCGCTGACTGTTCCTGGCGCAACTGAAGTAGCGAACAACGTTCTGGCGC TGTACATGCAGGATCGCTATCTCGGCAAGATGAACCGTGTCGCTGACGATATTACTGTCGCGCCGGAATATCTGGAGGAG AGCAACGGTCAGGCATGGGCGCGCGGCGGTGCGGGCGACCGTCTGCTGATGTACGCGCAGCTGAAGGAGTGGGCAGAGAA AAACTTTGATATCAAACAGTGGTATCCAGAAGGTGACCTGCCTAAGTTCTACAGCGATCGTGAAGGGATGAAAGGCTGGA ACCTGTTCCAGTTGATGCACCGTAAAGCACGCGGCGATGATGTTGGCAAAACCAAGTTTGGCGAAAGAAATTACTGTGCC GAATCCAACGGTAACGCTGCCGACAAGCTGATGCTGTGTGCCTCCTGGGTCGCTCAGACGGATCTTTCGGAGTTCTTTAA GAAATGGAATCCGGGCGCGAATGCTTACCAGTTACCGGGAGCGAGCGAGATGAACTTCGAGGGCGGTGTGAGCCAGTCGG CTTACGAGACGCTGGCGGCGCTTAATCTGCCGAAACCGCAGCAAGGGCCGGAAACCATTAATCAGGTTACCGAGCATAAG ATGTCAGCTGAGTAA Protein sequence : MSLALLMNKKFKYKKSLLAAILSATLLAGCDGGGSGSSSDTPPVDSGTGSLPEVKPDPTPNPEPTPEPTPDPEPTPEPTP DPEPEPEPEPVPTKTGYLTLGGSQRVTGATCNGESSDGFTFTPGEDVTCVAGNTTIATFDTQSEAARSLRAVEKVSFSLE DAQELAASDDKKSNAVSLVTSSNSCPANTEQVCLTFSSVIESKRFDSLYKQIDLAPEEFKKLVNEEVENNAATDKAPSTH TSPVVPVTTPGTKPDLNASFVSANAEQFYQYQPTEIILSEGRLVDSMGNGVVGVNYYTSSGRGVTGENGKFNFSWGETIS FGIDTFELGSVRGNKSTIALTELGDEVRGANIDQLIHRYSQAGKNDEREVPDVVRKVFAEYPNVINEIINLSLSNGEALS EGDQTFERTNEFLEQFESGQAKEIDTAICDSLGGCNSQRWFSLTARNVNEGQIQGVINKLWGVDKDYKSVTKFHVFHDST NFYGSTGNARGQAVVNISNAAFPILMARNDKNYWLAFGEKRAWDKNELAYITEAPSLVEPENVTRDTATFNLPFISLGQV GEGKLMVIGNPHYNSILRCPNGYSWEGGVDKNGQCTRNSDSNDMKHFMQNVLRYLSDDKWTPDAKASMTVGTNLDTVYFK RHGQVTGNSAEFGFHPDFAGISVEHLSSYGDLDPQEMPLLILNGFEYVTQVGNDPYAIPLRADTSKPKLTQQDVTDLIAY LNKGGSVLIMENVMSNLKEESASGFVRLLDAAGLSMALNKSVVNNDPQGYPNRVRQQRATGIWVYERYPAVDGALPYTID SKTGEVKWKYQVENKPDDKPKLEVASWLEDVDGKQETRYAFIDEADHKTEDSLKAAKAKIFEKFPGLKECKDPTYHYEVN CLEYRPGTGVPVTGGMYVPQYTQLSLNADTAKAMVQAADLGTNIQRLYQHELYFRTNGRKGERLSSVDLERLYQNMSVWL WNKIEYRYENDKDDELGFKTFTEFLNCYANDAYTGGTQCSDELKKSLVDNNMIYGEKSVNKAGMMNPSYPLNYMEKPLTR LMLGRSWWDLNIKVDVEKYPGAVSAEGEKVTETISLYSNPTKWFAGNMQSTGLWAPAQKEVTIESSASVPVTVTVALADD LTGREKHEVALNRPPKVTKTYDLKANDKVTFKVPYGGLIYIKGNSPKNESAEFTFTGVVKAPFYKDGEWKNALNSPAPLG ELESDAFVYTTPKKNLEASNFTGGVAEFAKDLDTFASSMNDFYGRNDEDGKHRMFTYKNLTGHKHRFTNDVQISIGDAHS GYPVMNSSFSTNSTTLPTTPLNDWLIWHEVGHNAAETPLTVPGATEVANNVLALYMQDRYLGKMNRVADDITVAPEYLEE SNGQAWARGGAGDRLLMYAQLKEWAEKNFDIKQWYPEGDLPKFYSDREGMKGWNLFQLMHRKARGDDVGKTKFGERNYCA ESNGNAADKLMLCASWVAQTDLSEFFKKWNPGANAYQLPGASEMNFEGGVSQSAYETLAALNLPKPQQGPETINQVTEHK MSAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAE85238.1 | hypothetical protein | Not tested | PAI V 536 | Protein | 0.0 | 98 |
| VC0395_A0370 | YP_001216326.1 | lipoprotein | Not tested | VPI-1 | Protein | 0.0 | 49 |
| VC0845 | NP_230493.1 | hypothetical protein | Not tested | VPI-1 | Protein | 0.0 | 49 |
| acfD | AAK20802.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75664.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 48 |
| acfD | ACK75670.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 48 |
| acfD | ACK75649.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 48 |
| acfD | ACK75655.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 48 |
| acfD | ACK75652.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 48 |
| acfD | ACK75646.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 48 |
| acfD | ACK75661.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 48 |
| acfD | ACK75667.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 48 |
| acfD | ACK75658.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| yghJ | YP_002409370.1 | inner membrane lipoprotein | VFG0106 | Protein | 0.0 | 49 |
