Gene Information

Name : ECIAI39_3451 (ECIAI39_3451)
Accession : YP_002409361.1
Strain : Escherichia coli IAI39
Genome accession: NC_011750
Putative virulence/resistance : Virulence
Product : putative GspI-like type II secretion protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3603561 - 3603932 bp
Length : 372 bp
Strand : -
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt : putative transporter

DNA sequence :
ATGAAGCGTGGATTTACCTTGCTGGAAGTAATGCTCGCGCTGGCGATTTTTGCGTTGGCCGCCATGGCGGTGTTACAGAT
CGCCAGCGGCGCGCTGAGTAATCAGCAAATCCTTGAAGAAAAAACGGTAGCGGGCTGGGTAGCTGAAAACCAGACCGCAC
TGCTTTACCTGATGACCCGTGAACAACGAGCGGTCAGGCACCAGGGCGAGAGTGATATGGCAGGAAGCCGCTGGTACTGG
CGAACCACACCGCTGAGTACAGGCAACGCGCTGCTCCAGGCAGTGGATATTGAAGTCAGCCGTCACGAAGACTTTTCGTC
GGTGATTCAGTCACGACGCGCCTGGTTTAGCGCCGTGGGAGGCCAACAGTGA

Protein sequence :
MKRGFTLLEVMLALAIFALAAMAVLQIASGALSNQQILEEKTVAGWVAENQTALLYLMTREQRAVRHQGESDMAGSRWYW
RTTPLSTGNALLQAVDIEVSRHEDFSSVIQSRRAWFSAVGGQQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspI CAE85229.1 GspI, hypothetical type II secretion protein Not tested PAI V 536 Protein 8e-42 99
gspI YP_854402.1 type II secretion protein GspI Not tested PAI I APEC-O1 Protein 6e-40 95

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECIAI39_3451 YP_002409361.1 putative GspI-like type II secretion protein VFG2052 Protein 6e-42 95