Gene Information

Name : papE (ECIAI39_3401)
Accession : YP_002409318.1
Strain : Escherichia coli IAI39
Genome accession: NC_011750
Putative virulence/resistance : Virulence
Product : fimbrial tip protein PapE
Function : -
COG functional category : N : Cell motility
COG ID : COG3539
EC number : -
Position : 3553636 - 3554175 bp
Length : 540 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 2869489, 2895103, 1357526, 10049807; Product type s : structure

DNA sequence : 
TTGTACAGGATATTTCAGATGAAAAAGATAAGAGGTTTGTGTCTTCCGGTAATGCTGGGGGCAGTGTTAATGTCTCAGCA
TGTACATGCAGCTGATAATCTGACCTTTAAAGGAAAACTGATTATTCCTGCCTGTACTGTACAAAATGCTGAAGTTAACA
GGGGTGATATTGAAATTCAGAAGCTGGTACAGAGTGGCGGAAATCAGAAAGACTTTACTGTCCAGATGACCTGTCCTTAT
CATTTGGGAACAATGAAGGTTACGATAACGGCAACAAACACTTATAACAATGCTATTTTAGTTCAGAATACATCAAACAC
ATCTTCTGATGGGTTACTTGTTTATCTTTATAGCAGTAATGCAGGAAATATTGGGACTGCGATAACTTTAGGGACTCCAT
TTACGCCCGGAAAAATCACAGGTAATAATGCAGATAGAACTATATCACTTCATGCCAAACTTGGATATAAAGGGAATATG
CAGAGTCTGAAGGCTGGGGATTTTTCTGCGACAGCAACGCTGGTTGCATCATATTCGTAA

Protein sequence : 
MYRIFQMKKIRGLCLPVMLGAVLMSQHVHAADNLTFKGKLIIPACTVQNAEVNRGDIEIQKLVQSGGNQKDFTVQMTCPY
HLGTMKVTITATNTYNNAILVQNTSNTSSDGLLVYLYSSNAGNIGTAITLGTPFTPGKITGNNADRTISLHAKLGYKGNM
QSLKAGDFSATATLVASYS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
papE_2 NP_757029.1 PapE protein Virulence PAI II CFT073 Protein 3e-70 91
papE NP_755460.1 PapE protein Virulence PAI I CFT073 Protein 3e-70 91
papE AAZ04420.1 P pilus tip protein Virulence PAI I APEC-O1 Protein 3e-63 87
papE YP_854250.1 PapE protein Virulence PAI I APEC-O1 Protein 5e-63 87
prfE CAD42025.1 PrfE protein Virulence PAI II 536 Protein 3e-62 79
prsE YP_002414011.1 Fimbrial protein Not tested Not named Protein 3e-61 76

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
papE YP_002409318.1 fimbrial tip protein PapE VFG0899 Protein 8e-71 91
papE YP_002409318.1 fimbrial tip protein PapE VFG0888 Protein 8e-71 91
papE YP_002409318.1 fimbrial tip protein PapE VFG1544 Protein 1e-62 79