Name : ycbR (ECIAI39_2208) Accession : YP_002408171.1 Strain : Escherichia coli IAI39 Genome accession: NC_011750 Putative virulence/resistance : Virulence Product : putative periplasmic pilin chaperone Function : - COG functional category : N : Cell motility COG ID : COG3121 EC number : - Position : 2255183 - 2255884 bp Length : 702 bp Strand : - Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pf : putative factor DNA sequence : ATGAAAACTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCAATATTACTCAGCTGTTCGTTCACATGGGCGGC AGGTAAAGGTGGGGTCGGACTTGCAGCAACACGTCTTGTTTATTCGGAAGGTGAAGAGCAAATTTCACTGGGTGTACGTA ACACCAGTCCGGATGTTCCTTATCTGATTCAGTCATGGGTGATGACACCAGATAATAAAAAGTCAGCGGACTTTATTATT ACACCACCGCTATTTGTGCTGAATCCGGCAAACGAGAACCTGCTACGCATTATGTACATTGGCGCGCCGTTGGCGAAAGA CAGAGAAACTCTTTTCTTCACCAGCGTACGGGCAGTCCCTTCAACAACGAAGCGGGAAGAAGGCAATACCCTGAAGATTG CCACACAAAGCGTCATCAAACTTTTCTGGCGACCAAAAGGTTTAGCGTATCCCTTAGCCGAGGCTCCGGCGAAACTGCGT TGCACTTCGTCAGCTGACATGGTTACGGTCAGTAACCCAACACCTTATTTCATTACCCTGACAGACCTGAAAATAGGTGG AAAAGTAGTTAAAAATCAAATGATTTCCCCCTTTGATAAATACCAATTCTCTCTGCCAATGGGTGCCAAAAACAGCAGCG TAACGTACCGAACTATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAA Protein sequence : MKTCITKGIVTVSLTAILLSCSFTWAAGKGGVGLAATRLVYSEGEEQISLGVRNTSPDVPYLIQSWVMTPDNKKSADFII TPPLFVLNPANENLLRIMYIGAPLAKDRETLFFTSVRAVPSTTKREEGNTLKIATQSVIKLFWRPKGLAYPLAEAPAKLR CTSSADMVTVSNPTPYFITLTDLKIGGKVVKNQMISPFDKYQFSLPMGAKNSSVTYRTINDYGAETPQLNCKS |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
fim2C | AFH78430.1 | putative fimbrial chaperone protein | Virulence | KpGI-5 | Protein | 2e-38 | 45 |
sfaE | CAC16952.2 | SfaE protein | Virulence | PAI III 536 | Protein | 3e-37 | 45 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
ycbR | YP_002408171.1 | putative periplasmic pilin chaperone | VFG0911 | Protein | 1e-37 | 45 |
ycbR | YP_002408171.1 | putative periplasmic pilin chaperone | VFG1644 | Protein | 2e-37 | 45 |
ycbR | YP_002408171.1 | putative periplasmic pilin chaperone | VFG0875 | Protein | 2e-38 | 45 |
ycbR | YP_002408171.1 | putative periplasmic pilin chaperone | VFG0445 | Protein | 1e-37 | 42 |