|
Name : pin (ECIAI39_1976) Accession : YP_002407948.1 Strain : Escherichia coli IAI39 Genome accession: NC_011750 Putative virulence/resistance : Unknown Product : DNA-invertase (site specific recombinase) from prophage Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1961 EC number : - Position : 2038246 - 2038818 bp Length : 573 bp Strand : + Note : Evidence 2b : Function of strongly homologous gene; Product type h : extrachromosomal origin DNA sequence : ATGCTGATTGGCTACATACGTGTGTCAACAAATGACCAAAACACAGATTTGCAACGCAATGCATTAATGTGCGCAGGATG TGAACAGATTTTTGAGGACAAAATGAGCGGAACCAAGTCGGAACGACCAGGCCTGAAACGCGCTTTAAAGTGCCTTAAAA GAGGGGATACATTGGTGGTCTGGAAGCTGGATCGGTTGGGTAGAAGAATGAAACACCTCATTGCTCTCACAGAAGAGTTA CGCGCAAAAGGTGTCAATTTTCGCAGTCTGACGGATTCAATCGATACCAGCACTCCGATGGGAAGGTTCTTTTTTCATAT GATGGGTGCACTGGCAGAAATGGAGCGTGAACTGATAGTTGAGCGCACGCTGGCAGGACTGGCTGCTGCGCGAGCACAAG GAAGAGTTGGAGGACGTCGCCCGAAACTGACGAAGGAGCAGCATGAGCAGATCGCAAGATTGCTCCAGAAAGGGTATGAC AGAAAGCGGCTGGCAATTATCTATGATATTGGACTGTCAACGATCTACCGCTATCACCCTGTTGGGACTGTCATAACGCA ACCTGAAATGTAA Protein sequence : MLIGYIRVSTNDQNTDLQRNALMCAGCEQIFEDKMSGTKSERPGLKRALKCLKRGDTLVVWKLDRLGRRMKHLIALTEEL RAKGVNFRSLTDSIDTSTPMGRFFFHMMGALAEMERELIVERTLAGLAAARAQGRVGGRRPKLTKEQHEQIARLLQKGYD RKRLAIIYDIGLSTIYRYHPVGTVITQPEM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CDBH8_0918 | YP_005160010.1 | transposase-like protein | Not tested | Not named | Protein | 2e-38 | 56 |
| res | AGK06929.1 | resolvase | Not tested | SGI1 | Protein | 8e-30 | 50 |
| res | AGK06966.1 | resolvase | Not tested | SGI1 | Protein | 8e-30 | 50 |
| res | AGK07012.1 | resolvase | Not tested | SGI1 | Protein | 8e-30 | 50 |
| res | AGK07070.1 | resolvase | Not tested | SGI1 | Protein | 8e-30 | 50 |
| res | AAK02044.1 | resolvase | Not tested | SGI1 | Protein | 8e-30 | 50 |
| tnpR | ACD85600.1 | TnpR resolvase | Not tested | SGI2 | Protein | 8e-30 | 50 |
| res | AGF34985.1 | resolvase | Not tested | SGI1 | Protein | 8e-30 | 50 |
| res | AGF35025.1 | resolvase | Not tested | SGI1 | Protein | 8e-30 | 50 |
| res | AGF35059.1 | resolvase | Not tested | SGI1 | Protein | 8e-30 | 50 |
| binR | YP_254224.1 | resolvase/integrase BinR | Not tested | ¥ðSh1 | Protein | 3e-30 | 50 |
| SH1761 | YP_253676.1 | DNA-invertase | Not tested | ¥ÕSh1 | Protein | 4e-31 | 50 |
| binL | YP_254524.1 | DNA-invertase | Not tested | ¥ðSh2 | Protein | 4e-31 | 50 |
