Gene Information

Name : ECIAI39_1878 (ECIAI39_1878)
Accession : YP_002407857.1
Strain : Escherichia coli IAI39
Genome accession: NC_011750
Putative virulence/resistance : Unknown
Product : transposase ORF B (fragment), IS629
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1959658 - 1960044 bp
Length : 387 bp
Strand : +
Note : Evidence 7 : Gene remnant; Product type pe : putative enzyme

DNA sequence :
ATGGAAACGACATTCGTGCTGGATGCACTGGAGCAGGCGTTATGGGCCCGTCGACCGTCCGGCACGGTCCATCACAGTGA
TAAAGGTTCTCAGTATGTATCGCTGGCCTACACACAGCGGCTTAAGGAAGCCGGATTACTGGCATCAACAGGAAGTACAG
GCGACTCGTATGACAACGCGATGGCGGAGAGCATCAATGGTCTTTACAAAGCGGAGGTAATACACCGTAAGAGCTGGAAA
AACCGTGCAGAAGTGGAACTGGCCACACTCACGTGGGGGGACTGGTATAACAATCGACGATTGCTGGAAAGGCTGGGCCA
TACTCCTCCGGCAGAAGCAGAAAAAGCTTATTATGCTTCCATCGGAAACGATGATCTGGCAGCCTGA

Protein sequence :
METTFVLDALEQALWARRPSGTVHHSDKGSQYVSLAYTQRLKEAGLLASTGSTGDSYDNAMAESINGLYKAEVIHRKSWK
NRAEVELATLTWGDWYNNRRLLERLGHTPPAEAEKAYYASIGNDDLAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
r15 AAC61720.1 putative transposase R15 Not tested PAI I CFT073 Protein 5e-50 93
unnamed AAT48693.1 unknown Not tested PAI I 4787 Protein 4e-50 93
c3594 NP_755469.1 transposase Not tested PAI I CFT073 Protein 9e-50 93
CDCE8392_1980 YP_005134511.1 transposase-like protein Not tested Not named Protein 2e-18 52
CDC7B_2058 YP_005163499.1 transposase-like protein Not tested Not named Protein 2e-18 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECIAI39_1878 YP_002407857.1 transposase ORF B (fragment), IS629 VFG1715 Protein 3e-50 93