Gene Information

Name : irp (ECIAI39_1079)
Accession : YP_002407092.1
Strain : Escherichia coli IAI39
Genome accession: NC_011750
Putative virulence/resistance : Virulence
Product : yersiniabactin-iron transporter permease YbtX
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1158786 - 1160066 bp
Length : 1281 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt : putative transporter

DNA sequence :
ATGAGTGATGTTCAGTCGAATGTGAAACCTCTGACGTTGACGACCGGGCGGGTGATTTTTGCTATTGCCGGCGTCTATGT
GACGCAGAGTCTGGTATCGGCGCTGTCTATGCAGTCCTTACCCGCGCTGGTGCGCGCTGCTGGCGGTTCGCTGGCGCTTG
CCGGTGCGACAACCCTGTTTATGCTGCCCTGGGCGCTGAAGTTTATTTGGGCGCCGTGGATCGAGCGCTGGCGGCTTCCG
CCCGGTAGCCAGGAACGCCGTTCCCGCATGTTAATCCTGCGTGGTCAGGTCGCGCTAGCGGCGATCCTGACTATTGCCGC
AGCGATTGGCTGGTTTGGGCGAGAAGGGGGATTCCCCGATACGCAAATCGTCGCGTTATTTGTTCTGTTTATGGTGGCAG
GCACGGTCGCCTCCACCATTGATATCGCCAGCGACGGCTTTTGTGTCGATCAACTGACCCGCACGGGTTACGGCTGGGGA
AACAGCGTGCAGGTCGGCGGCAGCTATCTGGGAATGATGTGCGGCGGCGGGGTGTTCCTGATGCTGTCGGCGGCATCCGG
CTGGCCTGTCGCCATGCTGATGATGGCGGTGCTGATTATGGCGCTGTCACTCCCGCTGTGGCGCATTACGGAGCCGACGC
GAACAGCGACTATCCCGCATGTTCCGGCGTTAGGTTATGCCCTAAGGAGGAAGCAGGCGCGCCTGGGCTTACTGCTGGTA
TTGATGCTGAATTCAGGCATGCGGTTTGTGCTGCCTCTTCTGGCACCGCTGTTGTTGGATCATGGGTTGAGCATGTCCGC
ATTGGGCGCGCTGTTCAGCGGCGGCAATATTGCAGCGGGCATAGCAGGAACGCTGGCCGGCGGATTGCTGATGAAATACA
CCTCACCCGGCAGAGCGCTGTTGACAGCTTATGGCGTCCAGGGGATCGCGCTGCTGGCGGTGGTGATGACGCTCATGATG
GCGCCGGGTCATCTGCTGCTGCAGATTCTCCAGTGTCTGGTCATTGTCCAGTCCATTTCGCTGGCCTGCGCGCTGGTCTG
TCTTTACGCCACGCTGATGTCGCTTTCATCGCCTTTGCAGGCCGGTGTCGACTTCACCCTCTTTCAATGTACTGACGCGG
CAATCGCCATTCTGGCTGGCGTTATCGGTGGCGTTGTTGCTCAACATTTTGGCTATGCGGCCTGCTTCCTGTTTGCCGGG
GCATTCACGTTGCTGGCGGCGTGGGTTGCTTATATCCGGCTGCATTCGGCAAGAGAACTGATGACAAGCGCAATTGATTG
A

Protein sequence :
MSDVQSNVKPLTLTTGRVIFAIAGVYVTQSLVSALSMQSLPALVRAAGGSLALAGATTLFMLPWALKFIWAPWIERWRLP
PGSQERRSRMLILRGQVALAAILTIAAAIGWFGREGGFPDTQIVALFVLFMVAGTVASTIDIASDGFCVDQLTRTGYGWG
NSVQVGGSYLGMMCGGGVFLMLSAASGWPVAMLMMAVLIMALSLPLWRITEPTRTATIPHVPALGYALRRKQARLGLLLV
LMLNSGMRFVLPLLAPLLLDHGLSMSALGALFSGGNIAAGIAGTLAGGLLMKYTSPGRALLTAYGVQGIALLAVVMTLMM
APGHLLLQILQCLVIVQSISLACALVCLYATLMSLSSPLQAGVDFTLFQCTDAAIAILAGVIGGVVAQHFGYAACFLFAG
AFTLLAAWVAYIRLHSARELMTSAID

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ybtX YP_853071.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 6e-121 100
irp8 YP_001006811.1 putative signal transducer Not tested HPI Protein 3e-119 99
irp8 YP_002346906.1 signal transducer Not tested HPI Protein 2e-121 99
ybtX YP_070128.1 MFS superfamily transporter signal transducer Virulence HPI Protein 2e-121 99
ybtX CAA21386.1 - Virulence HPI Protein 9e-121 99
ybtX NP_669702.1 hypothetical protein Virulence HPI Protein 5e-121 99
ybtX NP_993011.1 signal transducer Virulence HPI Protein 5e-121 99
irp8 CAB46571.1 signal transducer, Irp8 Virulence HPI Protein 2e-118 98