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Name : tetD (p1ECUMN_0052) Accession : YP_002405952.1 Strain : Genome accession: NC_011749 Putative virulence/resistance : Resistance Product : transcriptionnal regulator involved in tetracycline resistance Function : - COG functional category : K : Transcription COG ID : COG2207 EC number : - Position : 42340 - 42756 bp Length : 417 bp Strand : - Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 6094472; Product type pr : regulator DNA sequence : ATGTATATTGAACAGCATTCTCGCTATCAAAATAAAGCTAATAACATCCAATTAAGATATGATGATAAGCAGTTTCATAC AACGGTTATCAAAGATGTTCTATTATGGATTGAACATAATTTAGATCAGTCTTTACTGCTTGATGATGTGGCGAATAAAG CGGGTTATACCAAGTGGTATTTTCAGCGGCTGTTCAAAAAAGTAACAGGGGTCACACTGGCTAGCTATATTCGTGCTCGT CGTTTGACGAAAGCGGCTGTTGAGTTGAGGTTGACGAAAAAAACTATCCTTGAGATCGCATTAAAATATCAATTTGATTC CCAACAATCTTTTACACGTCGATTTAAGTACATTTTTAAGGTTACACCAAGTTATTATCGGCGTAATAAATTATGGGAAT TGGAGGCAATGCACTGA Protein sequence : MYIEQHSRYQNKANNIQLRYDDKQFHTTVIKDVLLWIEHNLDQSLLLDDVANKAGYTKWYFQRLFKKVTGVTLASYIRAR RLTKAAVELRLTKKTILEIALKYQFDSQQSFTRRFKYIFKVTPSYYRRNKLWELEAMH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tetD | AAL08447.1 | putative transcriptional regulator TetD | Not tested | SRL | Protein | 1e-59 | 100 |
| tetD | AEA34665.1 | tetracycline resistance protein D | Not tested | Not named | Protein | 1e-59 | 100 |
| soxS | YP_219131.1 | DNA-binding transcriptional regulator SoxS | Not tested | SPI-4 | Protein | 6e-21 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| tetD | YP_002405952.1 | transcriptionnal regulator involved in tetracycline resistance | NC_010558.1.6276025. | Protein | 5e-60 | 100 |
| tetD | YP_002405952.1 | transcriptionnal regulator involved in tetracycline resistance | BAC0371 | Protein | 4e-22 | 51 |
| tetD | YP_002405952.1 | transcriptionnal regulator involved in tetracycline resistance | CP000034.1.gene4505. | Protein | 8e-22 | 51 |
| tetD | YP_002405952.1 | transcriptionnal regulator involved in tetracycline resistance | NC_002695.1.914293.p | Protein | 4e-22 | 51 |
| tetD | YP_002405952.1 | transcriptionnal regulator involved in tetracycline resistance | CP001138.1.gene4488. | Protein | 2e-21 | 50 |
| tetD | YP_002405952.1 | transcriptionnal regulator involved in tetracycline resistance | CP001138.1.gene612.p | Protein | 8e-22 | 48 |
| tetD | YP_002405952.1 | transcriptionnal regulator involved in tetracycline resistance | CP001918.1.gene327.p | Protein | 3e-20 | 47 |
| tetD | YP_002405952.1 | transcriptionnal regulator involved in tetracycline resistance | CP000647.1.gene4499. | Protein | 3e-20 | 47 |
| tetD | YP_002405952.1 | transcriptionnal regulator involved in tetracycline resistance | CP000647.1.gene1624. | Protein | 1e-21 | 47 |
| tetD | YP_002405952.1 | transcriptionnal regulator involved in tetracycline resistance | CP001918.1.gene2033. | Protein | 4e-21 | 45 |
| tetD | YP_002405952.1 | transcriptionnal regulator involved in tetracycline resistance | CP001138.1.gene1637. | Protein | 3e-21 | 43 |
| tetD | YP_002405952.1 | transcriptionnal regulator involved in tetracycline resistance | NC_002695.1.917339.p | Protein | 2e-21 | 43 |
| tetD | YP_002405952.1 | transcriptionnal regulator involved in tetracycline resistance | BAC0560 | Protein | 2e-21 | 43 |
| tetD | YP_002405952.1 | transcriptionnal regulator involved in tetracycline resistance | CP000034.1.gene1596. | Protein | 1e-21 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| tetD | YP_002405952.1 | transcriptionnal regulator involved in tetracycline resistance | VFG1038 | Protein | 4e-60 | 100 |
| tetD | YP_002405952.1 | transcriptionnal regulator involved in tetracycline resistance | VFG0585 | Protein | 2e-21 | 50 |
