Gene Information

Name : p1ECUMN_0038 (p1ECUMN_0038)
Accession : YP_002405939.1
Strain :
Genome accession: NC_011749
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 30950 - 31645 bp
Length : 696 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; Product type t : transporter

DNA sequence : 
ATGTCCGTTACGCATATCCCTCAGGTGGCGATCGAAACCCGCCACTTATACAAACGGTTCGGTGACGTTACCGCCCTGGA
TGACATTAATCTGCGCATTGCGCAGGGTGAATTTGTCGCCATTATGGGCGCTTCTGGTTCTGGTAAAACCACGCTGATGA
ATATTCTGACGTGCCTTGATACGGCGACGGAAGGGCAGGTGTTTCTTGATGGCACCGATGCCGCCGCGCTGGATGAAGAG
GGGCGCCGTCGCTTTCGCGCCGAGAAAATCGGCCTGGTATTTCAGCAGTTCCATTTGATCCCGTTCTTAACTGCGCTGGA
AAACATCATGCTCGCCCAGCATTACCACAGCGTGGTGGATGAAGCGGCGGCGAGGAAGGTGCTGGAACAGGTAGGGCTTG
GGCATCGTGTGACGCACCTGCCGAGCCAGCTTTCCGGTGGTGAGCAGCAGCGTGTGTGTATCGCCCGGGCGCTGGTCAAC
GAACCGCCGGTTATTTTCGCGGATGAACCGACGGGCAACCTGGATGAAGAGAATGAGCAGCGGGTGCTGGATCTGCTCAC
CGATCTGCATCGTCAGGGGCGCACGATTGTGATGGTGACGCACAACCCTGCGCTTGGGCAGTTTGCCGACCGTATTCTGC
GGCTGCAACACGGTAAATATCTGGGTGAGGAGGCCAATCAACATGCGCTGGCATAA

Protein sequence : 
MSVTHIPQVAIETRHLYKRFGDVTALDDINLRIAQGEFVAIMGASGSGKTTLMNILTCLDTATEGQVFLDGTDAAALDEE
GRRRFRAEKIGLVFQQFHLIPFLTALENIMLAQHYHSVVDEAAARKVLEQVGLGHRVTHLPSQLSGGEQQRVCIARALVN
EPPVIFADEPTGNLDEENEQRVLDLLTDLHRQGRTIVMVTHNPALGQFADRILRLQHGKYLGEEANQHALA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-28 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-28 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-28 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
p1ECUMN_0038 YP_002405939.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 6e-33 46
p1ECUMN_0038 YP_002405939.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 6e-36 45
p1ECUMN_0038 YP_002405939.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 3e-45 45
p1ECUMN_0038 YP_002405939.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 8e-40 44