Gene Information

Name : istB (p1ECUMN_0148)
Accession : YP_002406039.1
Strain :
Genome accession: NC_011749
Putative virulence/resistance : Unknown
Product : transposase ORF2, IS21, ATP-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 113163 - 113963 bp
Length : 801 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : enzyme

DNA sequence :
GTGATGCATGAGCTGGAAGTCCTGCTGAGTCGCCTGAAAATGGAGCATCTGAGTTATCACGTTGAAAGCCTGCTGGAACA
GGCAGCTAAAAAAGAGCTGAACTACCGGGAGTTCCTGTGCATGGCGCTACAGCAGGAATGGAACGGCAGGCATCAGCGCG
GTATGGAGTCCAGGCTGAAGCAGGCTCGTCTGCCGTGGGTCAAAACGCTGGAGCAGTTCGACTTTACCTTCCAGCCGGGC
ATCGACCGTAAGGTTGTCCGGGAACTGGCTGGTCTGGCGTTCGTGGAGCGCAGCGAAAACGTGATCCTGCTGGGACCTCC
TGGTGTCGGAAAAACTCATCTGGCCATAGCTCTTGGCGTGAAAGCGGTGGATGCGGGACATCGGGTACTGTTTATGCCAC
TGGACAGACTGATCGCGACACTGATGAAAGCGAAACAGGAAAACCGGCTGGAGCGTCAGCTGCAGCAACTGAGTTATGCC
CGGGTGTTGATCCTGGATGAAATAGGCTATCTGCCGATGAACAGAGAGGAAGCCAGCCTGTTCTTCCGGCTACTGAACCG
TCGATATGAAAAAGCGAGCATCATACTGACGTCAAACAAAGGGTTCGCAGACTGGGGAGAAATGTTCGGAGATCACGTGC
TGGCAACAGCGATACTGGATCGGTTGCTACATCACTCAACCACGCTGAATATCAAAGGAGAGAGTTACCGGTTAAAAGAG
AAACGTAAAGCTGGAGTGCTGACCAAAAACACAACGCCAATCAGTGATGATGAAATGGTGAAAAGCGGACAGCATCAGTA
A

Protein sequence :
MMHELEVLLSRLKMEHLSYHVESLLEQAAKKELNYREFLCMALQQEWNGRHQRGMESRLKQARLPWVKTLEQFDFTFQPG
IDRKVVRELAGLAFVERSENVILLGPPGVGKTHLAIALGVKAVDAGHRVLFMPLDRLIATLMKAKQENRLERQLQQLSYA
RVLILDEIGYLPMNREEASLFFRLLNRRYEKASIILTSNKGFADWGEMFGDHVLATAILDRLLHHSTTLNIKGESYRLKE
KRKAGVLTKNTTPISDDEMVKSGQHQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 4e-48 47
y1094 CAD33719.1 ORF B protein Not tested PAI I 536 Protein 3e-38 47
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 1e-47 46
unnamed CAA21402.1 - Not tested HPI Protein 1e-47 46
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 1e-47 46
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 1e-47 46
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 1e-47 46
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 1e-47 46
api84 CAF28558.1 putative transposase Not tested YAPI Protein 1e-47 46
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 1e-47 46
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 1e-47 46
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 1e-47 46
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 7e-47 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
istB YP_002406039.1 transposase ORF2, IS21, ATP-binding protein VFG1460 Protein 2e-38 47
istB YP_002406039.1 transposase ORF2, IS21, ATP-binding protein VFG1606 Protein 6e-48 46
istB YP_002406039.1 transposase ORF2, IS21, ATP-binding protein VFG1515 Protein 6e-48 46
istB YP_002406039.1 transposase ORF2, IS21, ATP-binding protein VFG1627 Protein 6e-48 46
istB YP_002406039.1 transposase ORF2, IS21, ATP-binding protein VFG1663 Protein 4e-47 45