Gene Information

Name : p1ECUMN_0013 (p1ECUMN_0013)
Accession : YP_002405919.1
Strain :
Genome accession: NC_011749
Putative virulence/resistance : Unknown
Product : transposase ORF 1, ISEc8, IS66 family
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 13000 - 13404 bp
Length : 405 bp
Strand : -
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : enzyme

DNA sequence :
ATGAAATCATTAACCGCAGTGCGTAAAAAAAGCCCTAATTATCCCGTTGAGTTCAAAATCAAAATGGTTGAACTCTCGCA
TCGACCAGAGATCTCCGTAGCGCAACTCGCTCGTGAGCATGGGATCAACGATAATTTGCTGTTCAAGTGGCGCCAGTACT
GGCGCGAAGGAAAACTACGTCCTCCTTCAACAACAGAAAACAACGTGCCTGAGCTGCTCCCGATAACTCTTGATGCCGAA
GATGTTGTCCCTACAACCTCCCCCCGGTCACAACCTGTAGCTGCTGCGACACCTGAATCACTCAATATCAGCTGTGAAGT
GACGTTCCGGCACGGATCACTCCGTCTGAATGGTGCCATCAGCGAAAATATCCTGAACCTGCTGATACGGGAGCTCAAAC
GTTGA

Protein sequence :
MKSLTAVRKKSPNYPVEFKIKMVELSHRPEISVAQLAREHGINDNLLFKWRQYWREGKLRPPSTTENNVPELLPITLDAE
DVVPTTSPRSQPVAAATPESLNISCEVTFRHGSLRLNGAISENILNLLIRELKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3560 NP_755435.1 hypothetical protein Not tested PAI I CFT073 Protein 1e-58 100
ECUMN_3326 YP_002414006.1 putative transposase Not tested Not named Protein 1e-58 100
l0013 CAD33777.1 L0013 protein Not tested PAI I 536 Protein 1e-28 56
unnamed AAL99257.1 unknown Not tested LEE Protein 7e-29 56
unnamed ACU09437.1 IS66 family element orf1 Not tested LEE Protein 7e-29 56
unnamed AAL08462.1 unknown Not tested SRL Protein 2e-28 56
c3577 NP_755452.1 hypothetical protein Not tested PAI I CFT073 Protein 9e-29 56
unnamed AAC31492.1 L0013 Not tested LEE Protein 6e-29 56
Z5096 NP_290247.1 prophage-associated protein Not tested LEE Protein 9e-29 56
ECs4545 NP_312572.1 hypothetical protein Not tested LEE Protein 9e-29 56
Z1648 NP_287151.1 hypothetical protein Not tested TAI Protein 3e-20 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
p1ECUMN_0013 YP_002405919.1 transposase ORF 1, ISEc8, IS66 family VFG1697 Protein 3e-59 100
p1ECUMN_0013 YP_002405919.1 transposase ORF 1, ISEc8, IS66 family VFG1518 Protein 4e-29 56
p1ECUMN_0013 YP_002405919.1 transposase ORF 1, ISEc8, IS66 family VFG1708 Protein 2e-29 56
p1ECUMN_0013 YP_002405919.1 transposase ORF 1, ISEc8, IS66 family VFG1053 Protein 9e-29 56
p1ECUMN_0013 YP_002405919.1 transposase ORF 1, ISEc8, IS66 family VFG0791 Protein 2e-29 56