|
Name : ibrB (EC55989_0594) Accession : YP_002401710.1 Strain : Escherichia coli 55989 Genome accession: NC_011748 Putative virulence/resistance : Virulence Product : immunoglobulin-binding regulator Function : - COG functional category : K : Transcription COG ID : COG1475 EC number : - Position : 650309 - 650938 bp Length : 630 bp Strand : - Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 12057959; Product type r : regulator DNA sequence : ATGGGGGATACTATGCAACAACGATTAACGCAGGATTTAACGCAATTTCTCGCCAGCTTGCCGGAAGATGATCGCATCAA CGCGATTAATGAAATCCGCATGGCGATCCATCAGGTTAGCCCCTTTCGTGAAGAGCCAGTGGATTGCGTTCTGTGGGTTA AAAACAGCCAACTTATGCCTAATGATTACAACCCAAACAACGTGGCACCACCCGAAAAAAAACTGCTGAAAAAATCCATT GAAATAGATGGTTTTACCCAACCCATTGTGGTCACGCATACGGATAAAAATGCCCTGGAAATCGTGGATGGTTTTCACCG CCATGAAATTGGTAAAGGCTCATCATCATTAAAATTACGCTTAAAAGGTTATTTGCCGGTGACCTGTCTGGAAGGTACGC GTAATCAACGCATCGCCGCGACTATTCGTCATAATCGCGCTCGTGGACGCCATCAAATCACCGCCATGTCGGAAATCGTC CGTGAACTTAGCCAGTTGGGATGGGACGATAATAAAATTGGCAAAGAGCTGGGAATGGACAGCGACGAAGTGCTGCGCCT GAAGCAAATTAACGGTCTGCAAGAGCTGTTTGCCGACCGTCAATATTCCCGCGCCTGGACTGTCAAATAA Protein sequence : MGDTMQQRLTQDLTQFLASLPEDDRINAINEIRMAIHQVSPFREEPVDCVLWVKNSQLMPNDYNPNNVAPPEKKLLKKSI EIDGFTQPIVVTHTDKNALEIVDGFHRHEIGKGSSSLKLRLKGYLPVTCLEGTRNQRIAATIRHNRARGRHQITAMSEIV RELSQLGWDDNKIGKELGMDSDEVLRLKQINGLQELFADRQYSRAWTVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| Z1204 | NP_286739.1 | hypothetical protein | Not tested | TAI | Protein | 3e-57 | 57 |
| Z1644 | NP_287147.1 | hypothetical protein | Not tested | TAI | Protein | 3e-57 | 57 |
| Z1644 | AAQ19140.1 | putative ParB-like nuclease | Not tested | PAI I CL3 | Protein | 5e-57 | 57 |
| ibrB | ADD91736.1 | predicted transcriptional regulator IbrB | Not tested | PAI-I AL862 | Protein | 5e-57 | 57 |
| STY4584 | NP_458668.1 | conserved hypothetical protein | Not tested | SPI-7 | Protein | 8e-55 | 57 |
| z1204 | CAD33764.1 | Z1204 protein | Not tested | PAI I 536 | Protein | 1e-55 | 56 |
| t4278 | NP_807876.2 | hypothetical protein | Not tested | SPI-7 | Protein | 4e-55 | 54 |
| ORF_30 | AAZ04440.1 | conserved hypothetical protein | Not tested | PAI I APEC-O1 | Protein | 2e-43 | 54 |
| APECO1_3503 | YP_854305.1 | hypothetical protein | Not tested | PAI I APEC-O1 | Protein | 2e-43 | 54 |
| c5208 | NP_757056.1 | hypothetical protein | Not tested | PAI II CFT073 | Protein | 2e-43 | 54 |
| ef0120 | AAM75321.1 | EF0120 | Not tested | Not named | Protein | 4e-31 | 53 |
| EF0607 | NP_814365.1 | ParB-like nuclease domain-containing protein | Not tested | Not named | Protein | 5e-31 | 53 |
| M5005_Spy_0164 | YP_281528.1 | parB-like nuclease | Not tested | Not named | Protein | 5e-30 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ibrB | YP_002401710.1 | immunoglobulin-binding regulator | VFG1505 | Protein | 6e-56 | 56 |
