Gene Information

Name : EC55989_4916 (EC55989_4916)
Accession : YP_002405773.1
Strain : Escherichia coli 55989
Genome accession: NC_011748
Putative virulence/resistance : Virulence
Product : Transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1737
EC number : -
Position : 5015597 - 5016421 bp
Length : 825 bp
Strand : -
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pr : regulator

DNA sequence : 
ATGCCAGAAAATGAAAACCTGCTGCTGAGATTGCGCCAGAGCGTTGATGGATATAGTCGAACTCAACAGAAGCTGGGAGA
GTTTGTACTTAGCGATCCGGCAAAAGTTGTCTACCTGACGATTACCGAACTGGCGCGTGAAAGCGGCACCAGCGAGGCTA
GCGTCACACGTCTGTGCCGAACGCTGGGGTGTAAGGGCTATAACGAATTCAAAATGGCGCTTGCACTCGATCTCCGACAA
GTACAGTCTGTAGAGTACGGCGGTGATGAGATTGACAATGTGGTCAATGAATCCGTGCAAGCACTACAGGACACAGCAAA
ATTACTCGATAGGACCTTGCTGGAAGCAGCCACGCTTGCACTGCATCAGGCTCAGTCAGTACAGATTTATGGCGTAGCAG
CCAGTGCTATTCTGGGGGAGTATTTACATTACAAACTCCTGCGTCTGGGGAAACCCGCACAATTGTTCAGCGATATGCAT
CGTGCTGCCATGAACGCCACAACACTTAGTAAAAACACGTTCGTGGTGGCGATTTCCAGTTCTGGATCCACGCGCGATCT
GCTGCATGTCGTAAAACTAGCGCGTAAGCAAGGTGTGCGTGTACTGGCGCTGAGTAATACGCCGCGCAGTCCGTTAGCTT
CGCTGAGTGATATTCAACTGGTCGCGGCCAAACCGGAAGGCCCCTTGAGCGCCGGCGCGCTGAATGCCAAGGTGGGAGTT
ATGCTGTTGGTAGAGTTACTCACCACATCGCTGATTGCGCTGGATCATAAGTACAGCGATGTGAGCCAGCAAACTGCCAG
CGCGACCCTACCGCTACTGCTTTAA

Protein sequence : 
MPENENLLLRLRQSVDGYSRTQQKLGEFVLSDPAKVVYLTITELARESGTSEASVTRLCRTLGCKGYNEFKMALALDLRQ
VQSVEYGGDEIDNVVNESVQALQDTAKLLDRTLLEAATLALHQAQSVQIYGVAASAILGEYLHYKLLRLGKPAQLFSDMH
RAAMNATTLSKNTFVVAISSSGSTRDLLHVVKLARKQGVRVLALSNTPRSPLASLSDIQLVAAKPEGPLSAGALNAKVGV
MLLVELLTTSLIALDHKYSDVSQQTASATLPLLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VPI2_0023c ACA01840.1 RpiR family transcriptional regulator Not tested VPI-2 Protein 2e-48 44
VC1775 NP_231410.1 hypothetical protein Not tested VPI-2 Protein 2e-48 44
VC0395_A1373 YP_001217316.1 hypothetical protein Not tested VPI-2 Protein 2e-48 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EC55989_4916 YP_002405773.1 Transcriptional regulator VFG1108 Protein 9e-49 44