Gene Information

Name : EC55989_4886 (EC55989_4886)
Accession : YP_002405743.1
Strain : Escherichia coli 55989
Genome accession: NC_011748
Putative virulence/resistance : Virulence
Product : GTP-binding protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3596
EC number : -
Position : 4997095 - 4997979 bp
Length : 885 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe : enzyme

DNA sequence :
ATGTCATTCAGCCATTCTTCCCTCTCCGCACAAGTGAAATCACATCTGACGTTTCTTCCTGAAGAAATTCGCCAGAAAAT
CCTTGAACATCTCCACAGTGTTATTCATTACGAGCCCGTGATTGGCATTATGGGTAAATCCGGAACAGGCAAAAGCAGTC
TGTGTAATGCCATTTTTCAGTCCCGTATCTGCGCCACACATCCTCTGAACGGCTGCACCCGCCAGGCTCATCGTCTTACC
CTGCAGTTCGGTGAACGCAGAATGACGCTGGTCGATCTGCCCGGCATTGGTGAAACACCGCAGCATGATCAGGAATACCG
GACACTTTATCGTCAGCTGCTACCGGAACTGGATCTGATTATCTGGATCCTGCGGGCTGATGAACGTGCGTATGCTGCTG
ATATTGCCATGCATCAGTTTTTACTGAATGAAGGCGCAGATCCCTCGCGTTTTCTGTTTGTTCTCAGCCATGCCGATCGC
GTGTTTCCTGCTGAAGAATGGAATGCCACAGAAAAATGCCCGTCCCGTCAGCAGTCGCTCTCACTGGCGACGGTGACAGC
CCGGGTGGCAACCCTGTTCCCTTCATCATTTCCGGTACTCTCCGTTGCTGCACCTGTCGGCTGGAACCTTCCGGCGTTTG
TGTCGCTGATGATCCACGCACTGCCACCACAGGCAACCAGCGCGGTGTATTCACATATCCGGGGAGAAAACCGCTCTGAA
CAGGCCCAGAAACACGCACAACAGACTTTTGGTGAAACCATCGGGAAAAGTTTTGACGTCGCCGTTGCCCGTTTCAGTTT
TCCGGCCTGGATGTTACAGCTTCTGCGTAAAGCCCGGGACCGCATTATCCACCTGCTGATCACACTGTGGGAGCGTCTGT
TCTGA

Protein sequence :
MSFSHSSLSAQVKSHLTFLPEEIRQKILEHLHSVIHYEPVIGIMGKSGTGKSSLCNAIFQSRICATHPLNGCTRQAHRLT
LQFGERRMTLVDLPGIGETPQHDQEYRTLYRQLLPELDLIIWILRADERAYAADIAMHQFLLNEGADPSRFLFVLSHADR
VFPAEEWNATEKCPSRQQSLSLATVTARVATLFPSSFPVLSVAAPVGWNLPAFVSLMIHALPPQATSAVYSHIRGENRSE
QAQKHAQQTFGETIGKSFDVAVARFSFPAWMLQLLRKARDRIIHLLITLWERLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_3493 YP_854318.1 hypothetical protein Not tested PAI I APEC-O1 Protein 4e-135 98
c5162 NP_757010.1 hypothetical protein Not tested PAI II CFT073 Protein 4e-135 98
unnamed AAL67395.1 unknown Not tested PAI II CFT073 Protein 3e-135 98
ORF_43 AAZ04452.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 3e-135 98
unnamed CAD33781.1 hypothetical protein Not tested PAI I 536 Protein 6e-134 96
unnamed CAD42093.1 hypothetical protein Not tested PAI II 536 Protein 1e-131 95

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EC55989_4886 YP_002405743.1 GTP-binding protein VFG1522 Protein 3e-134 96
EC55989_4886 YP_002405743.1 GTP-binding protein VFG1612 Protein 8e-132 95