Gene Information

Name : EC55989_4880 (EC55989_4880)
Accession : YP_002405737.1
Strain : Escherichia coli 55989
Genome accession: NC_011748
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4991625 - 4992356 bp
Length : 732 bp
Strand : -
Note : Evidence 4 : Homologs of previously reported genes of unknown function

DNA sequence : 
ATGAATCAACCAATACACAATGATTACTGGTTATCCCGTTTTGAAAGTATTCTCAACAGTGCCCTGGTGCAACACCGTGC
CGTCTCGTTAATCCGGGTGGATTTACGTTTCCCTGAGCATATGCCTGTCACCATCATGGATCCCGATCCGGATTCAGCGG
TGATTTCTCGTTTTTTCGAATCCCTGAAAGCCAAAATTCAGGCTTACCAGCGGAAAAAACGACGTACCAACAAGCGTGTG
CGTGCAACCACCCTGCATTATTTCTGGTGTCGGGAGTTTGGCAAGGAAAAAGGCAGGAAACATTATCACGTGATATTACT
GCTCAACAAAGATACCTGGTGCTCGCCAGGGGATTTCACCGTTCCTTCTTCGCTGGCGACGCTGATCCAACTGGCATGGT
GTAGCGCTCTGCATCTTGAGCCCTGGCAGGGTAATGGACTGGTTCATTTTTCCAGGCGGACGCCTTTCCGTAAACCGGCA
TCATCTGATGCTCGCCCTTCTTCCGATGATACGCCTTTGTCGGGTGGATGTTCTGAAACCAGGAAGGCTTCAGACAAAAA
GCCGGGTGAAGCCGCTGTTCTCTGGATCAAGCGTGGTGATGTGGAAGCGATGCAGAAAGCCATGGAGAGAGCCCGTTATC
TCGTGAAGTATGAGACGAAGCAGCATGACGGTTCTGGTCAACGTAATTATGGTTGCAGCCGTGGAGCGGGGCGTCTACTG
GATGGCAGGTGA

Protein sequence : 
MNQPIHNDYWLSRFESILNSALVQHRAVSLIRVDLRFPEHMPVTIMDPDPDSAVISRFFESLKAKIQAYQRKKRRTNKRV
RATTLHYFWCREFGKEKGRKHYHVILLLNKDTWCSPGDFTVPSSLATLIQLAWCSALHLEPWQGNGLVHFSRRTPFRKPA
SSDARPSSDDTPLSGGCSETRKASDKKPGEAAVLWIKRGDVEAMQKAMERARYLVKYETKQHDGSGQRNYGCSRGAGRLL
DGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42091.1 hypothetical protein Not tested PAI II 536 Protein 2e-101 92
APECO1_3496 YP_854315.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-92 87
c5172 NP_757020.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-92 87
unnamed AAL67401.1 intergenic-region protein Not tested PAI II CFT073 Protein 1e-92 87
ORF_40 AAZ04449.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 1e-92 87
ECO103_3573 YP_003223434.1 hypothetical protein Not tested LEE Protein 1e-36 41
APECO1_1084 YP_853104.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 7e-35 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EC55989_4880 YP_002405737.1 hypothetical protein VFG1610 Protein 1e-101 92