|
Name : EC55989_4877 (EC55989_4877) Accession : YP_002405734.1 Strain : Escherichia coli 55989 Genome accession: NC_011748 Putative virulence/resistance : Unknown Product : transposase ORF A, IS100 Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4584 EC number : - Position : 4989608 - 4990630 bp Length : 1023 bp Strand : + Note : Evidence 2b : Function of strongly homologous gene; Product type pe : enzyme DNA sequence : ATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGTAGCCGGGCGATTGCCAGAGAACT GGGGATCTCCCGCAATACCGTTAAACGTTATTTGCAGGCAAAATCTGAGCCGCCAAAATATACGCCGCGACCTGCTGTTG CTTCACTCCTGGATGAATACCGGGATTATATTCGTCAACGCATCGCCGATGCTCATCCTTACAAAATCCCGGCAACGGTA ATCGCCCGCGAGATCAGAGACCAGGGATATCGTGGCGGAATGACCATTCTCAGGGCATTCATTCGTTCTCTCTCGGTTCC TCAGGAGCAGGAGCCTGCCGTTCGGTTCGAAACTGAACCCGGACGACAGATGCAGGTTGACTGGGGCACTATGCGTAATG GTCGCTCACCGCTTCACGTGTTCGTTGCTGTTCTCGGATACAGCCGAATGCTGTACATCGAATTCACTGACAATATGCGT TATGACACGCTGGAGACCTGCCATCGTAATGCGTTCCGCTTCTTTGGTGGTGTGCCGCGCGAAGTGTTGTATGACAATAT GAAAACTGTGGTTCTGCAACGTGACGCATATCAGACCGGTCAGCACCGGTTCCATCCTTCGCTGTGGCAGTTCGGCAAGG AGATGGGCTTCTCTCCCCGACTGTGTCGCCCCTTCAGGGCACAGACTAAAGGTAAGGTGGAACGGATGGTGCAGTACACC CGTAACAGTTTTTACATCCCACTAATGACTCGCCTTCGCCCGATGGGGATCACTGTCGATGTTGAAACAGCCAACCGCCA CGGTCTGCGCTGGCTGCATGATGTCGCTAACCAACGAAAGCATGAAACAATCCAGGCCCGTCCCTGCGATCGCTGGCTCG AAGAGCAGCAGTCCATGCTGGCACTGCCTCCGGAGAAAAAAGAGTATGACGTGCATCCTGGTGAAAATCAGGTGAACTTC GACAAATCCCCCCTGCATCATCCACTCTCCATCTACGACTCATTCTGCAGAGGAGTGGCGTGA Protein sequence : MVTFETVMEIKILHKQGMSSRAIARELGISRNTVKRYLQAKSEPPKYTPRPAVASLLDEYRDYIRQRIADAHPYKIPATV IAREIRDQGYRGGMTILRAFIRSLSVPQEQEPAVRFETEPGRQMQVDWGTMRNGRSPLHVFVAVLGYSRMLYIEFTDNMR YDTLETCHRNAFRFFGGVPREVLYDNMKTVVLQRDAYQTGQHRFHPSLWQFGKEMGFSPRLCRPFRAQTKGKVERMVQYT RNSFYIPLMTRLRPMGITVDVETANRHGLRWLHDVANQRKHETIQARPCDRWLEEQQSMLALPPEKKEYDVHPGENQVNF DKSPLHHPLSIYDSFCRGVA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| s0035 | CAD33773.1 | ORF A protein | Not tested | PAI I 536 | Protein | 2e-163 | 99 |
| y1093 | YP_002346890.1 | transposase for insertion sequence IS100 | Not tested | HPI | Protein | 3e-162 | 99 |
| y1094 | CAD42088.1 | OrfA protein of IS100 transposase | Not tested | PAI II 536 | Protein | 2e-163 | 99 |
| y2411 | NP_669718.1 | transposase | Not tested | HPI | Protein | 3e-162 | 99 |
| orfA | CAE85182.1 | OrfA protein, transposase, IS100 | Not tested | PAI V 536 | Protein | 2e-163 | 99 |
| YPTB1585 | YP_070113.1 | transposase | Not tested | HPI | Protein | 3e-162 | 99 |
| y1094 | CAC43410.1 | IS100 transposase; transposase ORFA | Not tested | PAI III 536 | Protein | 2e-163 | 99 |
| unnamed | CAA21403.1 | - | Not tested | HPI | Protein | 3e-162 | 99 |
| unnamed | CAB46599.1 | IS100 transposase | Not tested | HPI | Protein | 2e-162 | 99 |
| api83 | CAF28557.1 | transposase | Not tested | YAPI | Protein | 2e-162 | 99 |
| y1093 | CAD33720.1 | ORF A protein | Not tested | PAI I 536 | Protein | 1e-162 | 99 |
| unnamed | AAG37051.1 | unknown | Not tested | espC PAI | Protein | 2e-152 | 95 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| EC55989_4877 | YP_002405734.1 | transposase ORF A, IS100 | VFG1626 | Protein | 1e-163 | 99 |
| EC55989_4877 | YP_002405734.1 | transposase ORF A, IS100 | VFG1607 | Protein | 1e-163 | 99 |
| EC55989_4877 | YP_002405734.1 | transposase ORF A, IS100 | VFG1461 | Protein | 7e-163 | 99 |
| EC55989_4877 | YP_002405734.1 | transposase ORF A, IS100 | VFG1514 | Protein | 1e-163 | 99 |
| EC55989_4877 | YP_002405734.1 | transposase ORF A, IS100 | VFG0780 | Protein | 1e-152 | 95 |
