Gene Information

Name : EC55989_4679 (EC55989_4679)
Accession : YP_002405545.1
Strain : Escherichia coli 55989
Genome accession: NC_011748
Putative virulence/resistance : Unknown
Product : transposase (fragment)
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3464
EC number : -
Position : 4794357 - 4795040 bp
Length : 684 bp
Strand : -
Note : Evidence 7 : Gene remnant

DNA sequence : 
GTGCGTACGCGAACGCCTTCGCCAACTCTGAGTGTCGCGACTGGGTCTTCATCTTTTCCGCAACCAGCTTTCCAGGGATT
TCAACAGCGGTTTCGTTTTTCGCTGACACCATGGAGGGAGTGGTTAAAAGAGCAACGAGAAAGTGGTAATTATAACGCCA
GCCGGATATGGCGGGAAATGGTGGCCCGGGGATTTACAGGCAGTGAAACCATCGTCAGGGATGCGGTTGCCAAATGGCGT
AAAGGCTGGAACCCACCGGTTACTACTGCCGTCAGACTTCCTTCAGTCTCCCGGGTAAGCCGCTGGTTGATGCCCTGGAG
AATAACCAGGGATGAAGAAAATTATGCTTCCCGATTTATTAGTCTGATGTGTGAAAAAGAACCTGAGCTGAAAATAGCGC
AGCAACTGGCACTCGAGTTCTACCGTATTCTGAAAACCCAAAATAAATCACAGCTAAGCAGTTGGTTCACTCGAGTCCAC
GAAAGCGGTTCAGCAGAATTTCGGCGCGTGGCGGCGGGGATGGAAGCTGATGCTGCAGCTATATGTGAGGCAATCAGTAG
TCGCTGGAGTAATGGTGTTGTCGAAGGTCATGTAAATCGCCTGAAGAAGATGCTGAAACGCCAGATGTATGGTCGAGCAG
GATTTGAACTACTCAGGCAGAGGGTAATGAGTCCACTGGCATGA

Protein sequence : 
MRTRTPSPTLSVATGSSSFPQPAFQGFQQRFRFSLTPWREWLKEQRESGNYNASRIWREMVARGFTGSETIVRDAVAKWR
KGWNPPVTTAVRLPSVSRVSRWLMPWRITRDEENYASRFISLMCEKEPELKIAQQLALEFYRILKTQNKSQLSSWFTRVH
ESGSAEFRRVAAGMEADAAAICEAISSRWSNGVVEGHVNRLKKMLKRQMYGRAGFELLRQRVMSPLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SF2971 NP_708745.1 hypothetical protein Not tested SHI-1 Protein 1e-74 100
unnamed AAK00462.1 unknown Not tested SHI-1 Protein 9e-75 100

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EC55989_4679 YP_002405545.1 transposase (fragment) VFG0633 Protein 5e-75 100