Gene Information

Name : EC55989_4671 (EC55989_4671)
Accession : YP_002405539.1
Strain : Escherichia coli 55989
Genome accession: NC_011748
Putative virulence/resistance : Unknown
Product : transposase ORF1, IS66 family
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 4787129 - 4788742 bp
Length : 1614 bp
Strand : -
Note : Evidence 4 : Homologs of previously reported genes of unknown function

DNA sequence :
ATGAGTCAGAAATACCTCATTCGCATCGCAGAGCTGGAAAGGTTGCTCTCTGAGCAGGCTGAAGCCCTCCGTCAGAAAGA
CCAACAACTGAGTCTGGTTGAAGAGACGGAGGCCTTCCTGCGTTCTGTGCTGGCACGTGCCGAAGAAAAGATCGAAGAAG
ATGAACGGGAAATAGAACATCTGCGGGCTCAGATAGAAAAACTGCGCCGGATGCTGTTCGGTACCCGTTCTGAAAAACTG
CGTCGTGAAGTTGAACAGGCTGAGGCCCTGCTGAAGCAACGCGAACAGGACAGCGATCGTTACAGTGGGCGAGAGGATGA
CCCGCAGGTTCCCCGCCAGTTGCGACAGTCACGCCATCGTCGTCCGTTACCGGAGCATCTGCCCCGCGAAATAAACCGCC
TGGAGCCTGAAGAAAGCTGTTGCCCGGAGTGTGGCGGTGAGCTGGATTATCTGGGGGAAGTCAGTGCAGAACAACTGGAA
CTGGTGAGCAGCGCCCTAAAAGTGATCCGCACAGAACGGGTAAAAAAAGCCTGTACAAAATGTGACTGCATCGTTGAAGC
ACCGGCACCATCCCGTCCGATAGAGCGTGGTATCGCGGGCCCGGAGTTACTTGCCCGCGTGTTAACGGGAAAATACTGCG
AACATCTGCCACTGTATCGTCAGAGTGAAATCTTTGCCCGCCAGGGTGTCGAACTGAGCCGTGCCTTACTCTCCAACTGG
GTTGATGCGTGCTGCCAGTTAATGACTCCGCTGAATGATGCCCTGTACAGTTATGTGATGAACACCCGCAAGGTTCACAC
TAATGACACACCAGTAAAAGTACTGGCACCGGGCAGGAAGAAGGCGAAAACAGGATATATCTGGACGTATGTCCGGGATG
ACCGAAATGCCGGTTCGCCAGAACCTCCGGCGGTCTGGTTCGCCTACTCACCGGACCATCAGGGTAAACATCCGGAGCAA
CACCTTCGTCCCTTCCGGGGTATCCTGCAGGCAGATGCGTTCGCAGGTTACGATCGGCTGTTCAGTGCCGAACGTGAAGG
CGGCGCGTTGACGGAAGCAGGATGCTGGGCTCATGCACGGCGCAAAATCCACGATGTATATATCAGTACCAAAAGCGCGA
CGGCGGAAGAAGCACTGAAACTAATCGGTGAACTGTACGCCATTGAGCACGAAATACGCGGGTTGCCGGTGTCTGAACGC
CTGGCGGTCAGGCAAATGCAGAGTAAACCGCTACTGACTTCCCTGTATAAGCTGATGCAGGAGAAAGAACACACGTTATC
GAAAAAATGCCGTCTGAGAGATGCGTTCCGGTATATCAGGAAGCACTGGGTTGCGTTGTGCAACTTCTGTGATGACGGTC
TGGCGGAGGCGGACAATAACACAGCGGAAAGAGCGCTTCGTGCAGTCTGTCTCGGAAAGAAAAATTACGTGCTCTTCGGT
AGCGATCACGGCGGCGAGCGTGGTGCACTGCTGTACGGGCTGATCGGCACCTGCCGTCTGAACGGTATCGATCCGGAAGC
GTATCTGCGCCATATTCTGAGCGTACTGCCGGAATGGCCTTCCAACCGAGTTGGCGAACTCCTGCCATGGAACGTAGTAC
TCACCAATAAATAA

Protein sequence :
MSQKYLIRIAELERLLSEQAEALRQKDQQLSLVEETEAFLRSVLARAEEKIEEDEREIEHLRAQIEKLRRMLFGTRSEKL
RREVEQAEALLKQREQDSDRYSGREDDPQVPRQLRQSRHRRPLPEHLPREINRLEPEESCCPECGGELDYLGEVSAEQLE
LVSSALKVIRTERVKKACTKCDCIVEAPAPSRPIERGIAGPELLARVLTGKYCEHLPLYRQSEIFARQGVELSRALLSNW
VDACCQLMTPLNDALYSYVMNTRKVHTNDTPVKVLAPGRKKAKTGYIWTYVRDDRNAGSPEPPAVWFAYSPDHQGKHPEQ
HLRPFRGILQADAFAGYDRLFSAEREGGALTEAGCWAHARRKIHDVYISTKSATAEEALKLIGELYAIEHEIRGLPVSER
LAVRQMQSKPLLTSLYKLMQEKEHTLSKKCRLRDAFRYIRKHWVALCNFCDDGLAEADNNTAERALRAVCLGKKNYVLFG
SDHGGERGALLYGLIGTCRLNGIDPEAYLRHILSVLPEWPSNRVGELLPWNVVLTNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1600 NP_287104.1 hypothetical protein Not tested TAI Protein 0.0 90
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 0.0 90
Z1161 NP_286696.1 hypothetical protein Not tested TAI Protein 0.0 90
tnp AEA34687.1 IS66 family transposase Not tested Not named Protein 1e-142 87
unnamed AAC31494.1 L0015 Not tested LEE Protein 5e-136 63
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 5e-135 63
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 4e-135 63
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 4e-135 63
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 4e-135 63
tnp AEA34686.1 transposase Not tested Not named Protein 3e-135 63
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 6e-136 63
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 6e-136 63
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 5e-136 63
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 2e-130 62
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 2e-135 60
unnamed AAL57570.1 unknown Not tested LEE Protein 5e-136 60
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 9e-103 53
ECO103_3554 YP_003223421.1 hypothetical protein Not tested LEE Protein 2e-88 49
Z4317 NP_289543.1 hypothetical protein Not tested OI-122 Protein 2e-88 49
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 2e-95 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EC55989_4671 YP_002405539.1 transposase ORF1, IS66 family VFG1736 Protein 0.0 99
EC55989_4671 YP_002405539.1 transposase ORF1, IS66 family VFG0793 Protein 3e-136 63