Gene Information

Name : lpfB (EC55989_4001)
Accession : YP_002404929.1
Strain : Escherichia coli 55989
Genome accession: NC_011748
Putative virulence/resistance : Virulence
Product : Chaperone protein lpfB precursor
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 4081164 - 4081850 bp
Length : 687 bp
Strand : -
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 14977923; Product type m : membrane component

DNA sequence : 
ATGAAACGTATTAGCTTTGCTGTGCTGGCACTTTTAATGACCGCACAACAGTGTTTTGCTGGTGGCGTAGCCTTAAGCAC
GACGCGTGTTATTTATGATGGCGGCAAGAAAGAAGCGTCGCTGACCGTTGAAAACCATAATAAAAATGAAGAGTTTTTGA
TCCAGTCATGGATTGATGATGTGAATGGCAATAAAAAAACACCGTTTATTATTACACCGCCATTATTCAAACTTGATCCT
GATAAAAATAACGTCTTACGTATCGTCAATATTGAAGATACCTTACCTAAAGATCGTGAATCCGTTTACTGGATTAATGT
AAAGGCCATTCCTGCGAAAAGTGCTGAAAATGAAAATAAAAACGTCTTACAGATAGCCGTTCGCACCCGTTTGAAGTTGT
TCTATCGTCCAAAAGGTTTGCCGGGAAGCAACCTCGAGGCCATGAAACAGTTACGTTTCCAGCGTCAAAATAACCAAATT
GTGGTTAATAACGACTCCGCTTATAACCTGACCTTTAATCAGTTTTCCATTAATGGACAAAAGATTGAACGGGCGGGAAT
GGTTCTCGCGAAAGGAAAGTTAAACATTAACCTTCCAGCCGGTACAGGCAACGCGCACGAAGTGAAATACAGCATTATTA
ATGATTTCGGTGTTGCTGGCGAAATGCTGACGAAGCCGATTAACTGA

Protein sequence : 
MKRISFAVLALLMTAQQCFAGGVALSTTRVIYDGGKKEASLTVENHNKNEEFLIQSWIDDVNGNKKTPFIITPPLFKLDP
DKNNVLRIVNIEDTLPKDRESVYWINVKAIPAKSAENENKNVLQIAVRTRLKLFYRPKGLPGSNLEAMKQLRFQRQNNQI
VVNNDSAYNLTFNQFSINGQKIERAGMVLAKGKLNINLPAGTGNAHEVKYSIINDFGVAGEMLTKPIN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 4e-39 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lpfB YP_002404929.1 Chaperone protein lpfB precursor VFG0455 Protein 4e-74 70
lpfB YP_002404929.1 Chaperone protein lpfB precursor VFG0445 Protein 3e-42 42
lpfB YP_002404929.1 Chaperone protein lpfB precursor VFG1644 Protein 2e-39 41
lpfB YP_002404929.1 Chaperone protein lpfB precursor VFG0911 Protein 2e-39 41