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Name : yghJ (EC55989_3382) Accession : YP_002404344.1 Strain : Escherichia coli 55989 Genome accession: NC_011748 Putative virulence/resistance : Virulence Product : inner membrane lipoprotein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0810 EC number : - Position : 3462403 - 3466986 bp Length : 4584 bp Strand : - Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 1644747; Product type lp : lipoprotein DNA sequence : TTGTCACTTGCGTTATTAATGAATAAGAAATTTAAATATAAGAAATCGCTTTTAGCGGCTATTTTGAGTGCAACCCTGTT AGCCGGTTGTGATGGCGGTGGCTCCGGATCTTCCTCCGATACGCCGCCTGTAGATTCTGGAACAGGGTCTTTGCCGGAAG TGAAACCTGATCCAACACCAAACCCGGAGCCGACACCTGAGCCAACGCCGGACCCAGAACCTACGCCGGAACCGACACCT GATCCTGAGCCAACACCAGAACCGGAGCCAGAACCTGTTCCTACGAAAACGGGTTATCTGACTCTGGGCGGAAGCCTGCG GGTAACTGGTGATATCACCTGTAATGATGAATCCAGCGATGGCTTTACCTTTACACCAGGCGACAAAGTCACCTGTGTGG CAGGGAACAACACGACAATTGCTACCTTCGACACCCAGTCAGAAGCTGCGCGTAGCCTGCGTGCGGTTGAAAAAGTGTCG TTTAGTCTTGAGGACGCGCAAGAACTGGCGGGTTCCGACAACAAGAAAAGCAATGCGCTCTCGCTGGTCACCTCCATGAA CAGTTGCCCGGCGAATACAGAACAGGTGTGCCTGGAGTTCTCCTCGGTGATCGAGAGTAAACGTTTCGACTCGCTGTATA AGCAAATCGATCTGGCACCGGAAGAATTCAAAAAGCTGGTCAATGAAGAGGTGGAAAACAATGCCGCGACCGATAAAGCG CCATCCACTCATACTTCACCGGTCGTGCCCGCCACCACTCCGGGAACAAAACCGGATCTAAACGCTTCCTTCGTGTCGGC TAACGCGGAACAGTTTTATCAGTATCAACCCACTGAAATCATTCTCTCTGAAGGTCGACTGGTCGATAGTCAGGGGGATG GTGTTGTTGGTGTCAACTATTACACCAATTCCGGCCGTGGTGTAACCGGAGAAAACGGGGAATTTTCCTTTAGTTGGGGG GAAACCATCTCCTTTGGCATCGACACTTTTGAGCTTGGTTCTGTGCGTGGTAACAAGTCGACTATTGCATTGACTGAACT GGGTGATGAAGTTCGCGGGGCAAATATCGATCAGTTGATTCACCGCTATTCGAAGGCTGGACAAAATCACACGCGTGTAG TTCCGGATGAAGTGCGCAAGGTTTTTGCTGAATATCCCAACGTGATTAACGAGATTATCAATCTCTCGTTATCCAATGGT GCGACGCTGGGGGAAGGTGAGCAAGTCGTTAATCTGCCTAACGAATTTATCGAGCAGTTTAAGACGGGTCAGGCCAAAGA GATCGATACCGCGATTTGTGCGAAAACCGATGGTTGTAACGAGGCTCGCTGGTTCTCGCTGACAACGCGCAATGTTAATG ACGGCCAGATTCAGGGCGTTATCAACAAGCTGTGGGGCGTGGATACGAACTACAAATCTGTCAGTAAGTTCCATGTATTC CATGACTCTACCAACTTCTATGGCAGCACGGGTAATGCGCGCGGTCAGGCGGTGGTGAATATCTCCAACGCGGCCTTCCC GATTCTGATGGCGCGTAATGATAAAAACTACTGGCTGGCGTTTGGCGAAAAACGCGCCTGGGATAAAAATGAGCTGGCGT ACATTACTGAAGCGCCTTCCATTGTGCGACCAGAGAACGTGACACGCGAAACCGCCACCTTCAACCTGCCGTTTATCTCG CTGGGGCAAGTGGGCGATGGCAAGCTGATGGTTATCGGTAACCCACACTACAACAGCATCCTGCGTTGCCCGAACGGCTA CAGCTGGAACGGGGGCGTTAATAAAGACGGACAGTGTACGCTCAACAGCGACCCGGATGACATGAAGAACTTCATGGAGA ACGTGCTGCGCTATCTGTCAAATGATCGCTGGTTGCCGGATGCAAAATCCAGTATGACCGTGGGTACTAACCTGGACACG GTATATTTCAAAAAACATGGTCAGGTGCTGGGAAATAGCGCACCGTTTGCGTTCCACAAGGATTTCACTGGCATCACGGT CAAACCAATGACCAGCTATGGCAATCTGAATCCAGATGAAGTTCCTCTGTTGATCCTCAATGGCTTTGAATACGTCACAC AATGGGGTAGCGATCCTTACTCCATTCCTCTGCGCGCAGATACCAGCAAACCGAAGCTGACCCAGCAGGATGTGACCGAT TTGATCGCCTATATGAACAAAGGTGGATCGGTGCTGATCATGGAAAACGTGATGAGCAATCTTAAGGAAGAGAGCGCATC TGGCTTTGTACGTCTGCTTGATGCCGCAGGTTTGTCGATGGCGCTTAACAAGTCGGTAGTAAATAACGATCCGCAAGGCT ACCCTGACCGTGTTCGTCAACGACGTTCAACGCCAATTTGGGTCTATGAGCGTTATCCGGCTGTCGATGGTAAACCACCG TATACCATTGATGACACCACGAAAGAAGTTATCTGGAAATATCAGCAAGAAAACAAACCTGATGACAAACCGAAGCTGGA AGTTGCCAGCTGGCAGGAAGAAGTTGAGGGTAAACAGGTAACCCAATTCGCCTTTATTGATGAAGCCGACCACAAAACGC CTGAGTCACTGGCTGCGGCAAAACAGAGAATTCTGGACGCGTTCCCAGGGCTGGAAGTGTGTAAGGATTCTGACTATCAC TATGAGGTCAACTGTCTGGAATACCGCCCAGGCACGGGTGTGCCGGTAACCGGTGGCATGTATGTTCCGCAGTATACGCA GCTGGATCTTGGAGCTGACACTGCGAAAGCGATGCTGCAGGCTGCGGATTTAGGCACCAATATTCAGCGCCTGTATCAGC ATGAGCTTTATTTCCGTACCAATGGCCTCCAGGGTGAGCGTCTCAACAGCGTTGATCTGGAACGTTTATACCAAAACATG TCCGTCTGGCTGTGGAACGAGACGAAATATCGTTATGAAGAGGGTAAAGAAGACGAGCTGGGCTTTAAAACGTTCACTGA GTTTCTGAACTGCTACACCAACAATGCATACGTTGGCACGCAGTGTTCTGCTGAGCTGAAAAAATCGCTGATCGATAACA AGATGATTTATGGTGAAGAAAGCAGCAAAGCGGGCATGATGAACCCGAGCTACCCGCTCAACTATATGGAAAAACCGCTG ACACGCCTGATGCTGGGCCGTTCCTGGTGGGATCTGAACATCAAAGTTGATGTTGAGAAGTATCCGGGAGTGGTGAATAC AAACGGCGAAACCGTCACACAAAACATTAACTTGTACTCAGCTCCAACCAAATGGTTTGCAGGTAACATGCAGTCAACTG GCCTGTGGGCACCTGCCCAGCAGGAAGTCAGCATTGAGTCAAAGGCGACAGTTCCTGTGACCGTGACTGTTGCGCTGGCC GACGACCTGACAGGACGAGAGAAGCATGAAGTTAGCCTGAATCGTCCACCCAGAGTGACAAAAACCTATGACCTGAAAGC CAATGATAAGGTGACGTTCAAAGTCCCTTACGGTGGTCTGATTTACATCAAGGGCGACAGCAAAGAGGTGCAATCAGCTG ACTTCACCTTTACCGGTGTAGTAAAAGCGCCGTTCTATAAAGACGGTAAGTGGCAACACGATCTGAACTCCCCTGCCCCG CTGGGCGAACTGGAGTCTGCCTCGTTCGTCTATACCACACCGAAGAAGAACCTGAATGCCAGCAATTACACTGGCGGACT GGAGCAATTCGCTAACGATCTGGATACCTTTGCCAGCTCGATGAATGACTTCTACGGCCGTGATAGCGAAGACGGTAAGC ACCGGATGTTTACCTATAAAAACTTGCCGGGCCACAAACATCGTTTCGCCAACGATGTGCAGATCTCCATCGGTGATGCG CATTCGGGTTATCCGGTAATGAACAGCAGCTTCTCGCCGAACAGCACCACGCTGCCGACGACGCCGCTGAACGACTGGCT GATCTGGCATGAAGTCGGTCATAACGCCGCAGAAACGCCGTTGACTGTACCGGGTGCAACTGAAGTCGCTAACAACGTGC TGGCGCTGTACATGCAGGATCGTTATCTCGGCAAGATGAACCGTGTCGCTGACGATATTACCGTCGCACCGGAATATCTG GAGGAAAGCAACGGTCAGGCATGGGCGCGCGGCGGTGCGGGTGACCGTCTGCTGATGTACGCACAGCTGAAGGAATGGGC AGAGAAAAACTTTGATATCAAGAAATGGTATCCAGATGGCACTCCTCTGCCAGAGTTTTACAGCGAGCGTGAAGGGATGA AAGGCTGGAACCTGTTCCAGTTGATGCATCGTAAAGCACGCGGCGATGAGGTCAGCAATGACAAGTTTGGCGGCAAGAAT TACTGTGCTGAATCCAACGGTAACGCAGCGGACACGCTGATGCTGTGTGCCTCCTGGGTCGCCCAGACGGATCTTTCGGA GTTCTTTAAGAAATGGAATCCGGGCGCGAATGCTTACCAGTTGCCGGGAGCGACGGAGATGAGCTTCGAAGGCGGTGTGA GCCAGTCGGCGTACAACACGCTGGCGTCACTCAATCTGCCGAAACCGAAGCAAGGGCCGGAAACCATTAACAAGGTTACC GAGTATTCGATGCCTGCTGAATAA Protein sequence : MSLALLMNKKFKYKKSLLAAILSATLLAGCDGGGSGSSSDTPPVDSGTGSLPEVKPDPTPNPEPTPEPTPDPEPTPEPTP DPEPTPEPEPEPVPTKTGYLTLGGSLRVTGDITCNDESSDGFTFTPGDKVTCVAGNNTTIATFDTQSEAARSLRAVEKVS FSLEDAQELAGSDNKKSNALSLVTSMNSCPANTEQVCLEFSSVIESKRFDSLYKQIDLAPEEFKKLVNEEVENNAATDKA PSTHTSPVVPATTPGTKPDLNASFVSANAEQFYQYQPTEIILSEGRLVDSQGDGVVGVNYYTNSGRGVTGENGEFSFSWG ETISFGIDTFELGSVRGNKSTIALTELGDEVRGANIDQLIHRYSKAGQNHTRVVPDEVRKVFAEYPNVINEIINLSLSNG ATLGEGEQVVNLPNEFIEQFKTGQAKEIDTAICAKTDGCNEARWFSLTTRNVNDGQIQGVINKLWGVDTNYKSVSKFHVF HDSTNFYGSTGNARGQAVVNISNAAFPILMARNDKNYWLAFGEKRAWDKNELAYITEAPSIVRPENVTRETATFNLPFIS LGQVGDGKLMVIGNPHYNSILRCPNGYSWNGGVNKDGQCTLNSDPDDMKNFMENVLRYLSNDRWLPDAKSSMTVGTNLDT VYFKKHGQVLGNSAPFAFHKDFTGITVKPMTSYGNLNPDEVPLLILNGFEYVTQWGSDPYSIPLRADTSKPKLTQQDVTD LIAYMNKGGSVLIMENVMSNLKEESASGFVRLLDAAGLSMALNKSVVNNDPQGYPDRVRQRRSTPIWVYERYPAVDGKPP YTIDDTTKEVIWKYQQENKPDDKPKLEVASWQEEVEGKQVTQFAFIDEADHKTPESLAAAKQRILDAFPGLEVCKDSDYH YEVNCLEYRPGTGVPVTGGMYVPQYTQLDLGADTAKAMLQAADLGTNIQRLYQHELYFRTNGLQGERLNSVDLERLYQNM SVWLWNETKYRYEEGKEDELGFKTFTEFLNCYTNNAYVGTQCSAELKKSLIDNKMIYGEESSKAGMMNPSYPLNYMEKPL TRLMLGRSWWDLNIKVDVEKYPGVVNTNGETVTQNINLYSAPTKWFAGNMQSTGLWAPAQQEVSIESKATVPVTVTVALA DDLTGREKHEVSLNRPPRVTKTYDLKANDKVTFKVPYGGLIYIKGDSKEVQSADFTFTGVVKAPFYKDGKWQHDLNSPAP LGELESASFVYTTPKKNLNASNYTGGLEQFANDLDTFASSMNDFYGRDSEDGKHRMFTYKNLPGHKHRFANDVQISIGDA HSGYPVMNSSFSPNSTTLPTTPLNDWLIWHEVGHNAAETPLTVPGATEVANNVLALYMQDRYLGKMNRVADDITVAPEYL EESNGQAWARGGAGDRLLMYAQLKEWAEKNFDIKKWYPDGTPLPEFYSEREGMKGWNLFQLMHRKARGDEVSNDKFGGKN YCAESNGNAADTLMLCASWVAQTDLSEFFKKWNPGANAYQLPGATEMSFEGGVSQSAYNTLASLNLPKPKQGPETINKVT EYSMPAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAE85238.1 | hypothetical protein | Not tested | PAI V 536 | Protein | 0.0 | 87 |
| VC0395_A0370 | YP_001216326.1 | lipoprotein | Not tested | VPI-1 | Protein | 0.0 | 50 |
| acfD | AAK20802.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| VC0845 | NP_230493.1 | hypothetical protein | Not tested | VPI-1 | Protein | 0.0 | 49 |
| acfD | ACK75670.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75655.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75652.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75649.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75646.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75664.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75661.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75667.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75658.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| yghJ | YP_002404344.1 | inner membrane lipoprotein | VFG0106 | Protein | 0.0 | 49 |
