Gene Information

Name : EC55989_3353 (EC55989_3353)
Accession : YP_002404316.1
Strain : Escherichia coli 55989
Genome accession: NC_011748
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3434470 - 3435069 bp
Length : 600 bp
Strand : +
Note : Evidence 4 : Homologs of previously reported genes of unknown function

DNA sequence : 
TTGCTGCGTGCTAAAGGAGAGAATATTATGCAAAAACTTGAAAACCGGTGTGATCTGCTGCTCACCCAGCATCAGAAATG
GATGGCAAGTGTAACCCGGTTTATTGTCGCTCACGGAATGGGCTCTCCGCATCTTCATGGTTATCATCGCCTGACCCTGG
CCCACTTTTTTCTGCCGGAAAAAGGCACCATCATCTCGGTGGCACCACAGGGACTCTATCAGGTAGTCAACCCGGCAACG
CCACCGTTCATTCCTGCCATTCAGGAAGGGTTAATGACCAGCATTCAGACTCATGAAATCATGTTACTTACACATTTTAA
CCTGGGTGGTGTTTTACTCAGTGAACTACATCGTCTGGGAGAAAGCCGACTGGCAAACAGGCTGAACAGTCTGCTCCGGC
GTTTTGACGATCGCGATCTCTACCACACCCTGATATGGCTGTGCTGGTATGATCTGATGTGCGCCCACTCCATGCAGCCC
TGGACTGAAGAGTTAAAGCATAAATCACACGCAGAACTTGAAAGCTGGGCTGTGGCGCGCAAACGGGAAAAGCGCGAGCT
TGAACTGATGATTGACGAGTACCTGTTATACGCCTGTTGA

Protein sequence : 
MLRAKGENIMQKLENRCDLLLTQHQKWMASVTRFIVAHGMGSPHLHGYHRLTLAHFFLPEKGTIISVAPQGLYQVVNPAT
PPFIPAIQEGLMTSIQTHEIMLLTHFNLGGVLLSELHRLGESRLANRLNSLLRRFDDRDLYHTLIWLCWYDLMCAHSMQP
WTEELKHKSHAELESWAVARKREKRELELMIDEYLLYAC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
S3191 NP_838474.1 hypothetical protein Not tested SHI-1 Protein 2e-79 96
SF2988 NP_708762.1 hypothetical protein Not tested SHI-1 Protein 2e-79 96
unnamed AAK00471.1 unknown Not tested SHI-1 Protein 3e-71 96

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EC55989_3353 YP_002404316.1 hypothetical protein VFG0652 Protein 6e-80 96