Gene Information

Name : EC55989_3346 (EC55989_3346)
Accession : YP_002404311.1
Strain : Escherichia coli 55989
Genome accession: NC_011748
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3431557 - 3431946 bp
Length : 390 bp
Strand : -
Note : Evidence 4 : Homologs of previously reported genes of unknown function

DNA sequence : 
ATGACGATGTACGCAAAATCCTTTCTCGCACTTGATGGCAACGGACGTCTGACCGGTGCCCGTACCGCACAGACAGCGCC
ATACGATCGTTACACCTGCCACCTCTGTGGCAGTGCTCTCAGATACCACCCGCAATACGACACTGAACGTCCCTGGTTTG
AACACACTGACGACGGGCTGACTGAGCATGGTCATGAGTGCCCTTATGTCAGACCGGAGCGCAGAGAAATACTGTTGATT
AAACGCTTACGGCAATTCGTACCGGACGCCTTACCCGTAGTGCGTAAAGCCAGCTGGCACTGCAGACAATGTCACCACGA
TTATTATGGGGAGCAGTACTGCACACACTGTCATACAGGGCGCTTCAGTGAGGAGGTGGTTGCAGAATGA

Protein sequence : 
MTMYAKSFLALDGNGRLTGARTAQTAPYDRYTCHLCGSALRYHPQYDTERPWFEHTDDGLTEHGHECPYVRPERREILLI
KRLRQFVPDALPVVRKASWHCRQCHHDYYGEQYCTHCHTGRFSEEVVAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec60 AAW51743.1 Aec60 Not tested AGI-3 Protein 2e-48 95
unnamed ADD91715.1 hypothetical protein Not tested PAI-I AL862 Protein 5e-45 95
unnamed CAI43833.1 hypothetical protein Not tested LEE Protein 1e-45 94
unnamed AAK00467.1 unknown Not tested SHI-1 Protein 7e-47 93
S3186 NP_838469.1 hypothetical protein Not tested SHI-1 Protein 1e-46 93
SF2981 NP_708755.1 hypothetical protein Not tested SHI-1 Protein 1e-46 93
ECO103_3572 YP_003223433.1 hypothetical protein Not tested LEE Protein 4e-45 90
unnamed CAE85181.1 hypothetical protein Not tested PAI V 536 Protein 2e-43 90
APECO1_1083 YP_853103.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 4e-43 90

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EC55989_3346 YP_002404311.1 hypothetical protein VFG0645 Protein 3e-47 93