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Name : EC55989_3334 (EC55989_3334) Accession : YP_002404300.1 Strain : Escherichia coli 55989 Genome accession: NC_011748 Putative virulence/resistance : Virulence Product : chaperone clpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 3420014 - 3422680 bp Length : 2667 bp Strand : - Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pf : factor DNA sequence : GTGAATAACATGGAAAATTCGGCAGCCCTGTTACGTCGTCTTAATCATTACTGTGCCCGTGCACTGGAAGGCGCAGCCTC CCTTTGCCAGACCCGGGCCCATGCGGAAATCACCCCGGAGCACTGGTTACTGAAACTGCTGGAGCAGGGGGAAGGAGACC TTACCGTGCTGGGCAGGCGTTATGACTGGGATATGGACGCGATATGGCAGTCGCTGCTCGGCTGGCTGGATAACCAGCCC CGTAGCGTACGCAGTCGCCCGCAGCTTGCGCAGTCCCTGAATGCTCTGCTGAAACAGGCCTGGATGGTGGCCTCATTACA GGGAGAAGAACATATCCGCAGCGTGCATCTGCTGGGTGCCCTGACGGAAAATCCGCACCTGGTTCGCTGTGACGGGCTGT GGCCTCTGCTGACACTGAGTCAGAGCCAGTTGCAGCGTCTGTCCCCGCTGCTGGATGCGCAGCCTGATGAGTGTCCGGAG ACGTTACAGGATGCAGAGCCTGTGCTGCCTCAGGGAGACAGTGTGACCTTTATCGGGCGCCCTGTCGGTGCGGATACGGC AGGTATACCGTCAGGTGACCTGCCGCCGGTGTTACAGGGTGCGCTGGATAAATTCACCCGGGACATCACGGCCAGCGCGA GAGAGGGGAAAATTGACCCGGTATCGGGACGCGATACGGAAATCCGTCAGATGGTGGATATTCTCTCCCGCCGTCGCAAG AATAACCCGATTCTGGTGGGGGACCCCGGTGTGGGGAAAACGGCTCTGGTGGAAGGGCTCGCCCTGCGTATTGTGGAAGG TAACGTACCAGAATCTCTCAGACCCGTCACCCTGCGCACCCTTGACCTCGGCCTGCTGCAGGCCGGTGCCGGCGTGAAAG GTGAATTTGAACAGCGTCTGAAAAACGTGATTGATGCCGTGCAGCTGTCACCGGCTCCTGTACTGCTGTTTATAGATGAA GCCCATACCCTTATCGGTGCCGGTAATCAGGCCGGTGGCGCGGATGCGGCCAACCTGCTGAAGCCTGCGCTGGCGCGAGG CGAACTGCGCACCATTGCTGCCACCACCTGGTCTGAGTACAAACAATACCTGGAACGTGACGCGGCTCTGGAGCGGCGTT TTCAGATGGTCAAAGTGGACGAGCCGGATGATGAGACGGCCTGTCTGATGCTGCGCTCCCTGAAATCCCGTTATGCGGAA CATCATAACGTGCATATCACCGATGAGGCAGTACGTGCTGCCGTCACACTCTCGCGCCGTTATCTGACAGAACGTCAGTT ACCGGACAAGGCCGTTGACCTGCTTGATACTGCTGCTGCCCGTGTGCGGATGAGCCTCGACACGGTGCCGGAACAGCTGA CCCGAATCCGTTCACAGCTCGCTTCCCTCGGTATGGAAAAACAGGCACTGCTGGAAGATATTGCCGTTGGTCATCAGAAT CACGGCGAACGCCTGTCTGCCATTGAGCAGGAAGAGAACGTGCTGATGACAGCACGTGATGACCTGGAGCAGCAGTACGC CCGTGAGTGCGAACTCACCGGTGAGTTACTTGAAAGCCGCAGCGATATTTCCCGCCAGAGTGAGACACATCACCTGCAGC AGGCACTGCACGACATTCAGCAGAATCAGCCCCTGCTCAGTGTGGATGTTGACGTACGCACCGTTGCCGGTGTGGTCGCG GACTGGACCGGAGTGCCGTTATCCTCACTGATGAAGGATGAACAGACGGAACTGCTGCATCTGGAAAAGGATATCGGCAG ACGGGTGGTCGGACAGGACGTGGCACTGGAATCCATTGCACAGCGTCTGCGTGCGGCGAAAACGGGTCTGACATCCGGTA ACGGCCCCCAGGAGGTGTTCCTGCTGGTCGGCCCCAGTGGTGTGGGAAAAACCGAAACGGCACTGGCGCTGGCAGATGTG ATGTACGGCGGCGAAAAATCACTGATTACCATCAATCTGTCGGAATATCAGGAGCCCCATACGGTTTCCCAGCTTAAGGG TTCACCGCCCGGGTACGTGGGATACGGTCAGGGGGGTATTCTGACGGAAGCTGTACGTAAGCGCCCTTACAGCGTGGTGC TGCTGGATGAAGTGGAAAAGGCCCACCGGGATGTGCTGAATCTGTTCTACCAGGTGTTTGACCGGGGCTTTATGCGCGAC GGTGAGGGGCGTGAAATTGACTTCCGTAATACGGTCATTCTGATGACCTCCAATCTGGGCAGTGACCTTCTGATGCAGCA ACTGAGCGAAAAGCCGGAGACAACGGAATCGGAGCTGCATGAGCTTATCCGTCCACTGCTGCGCGACCACTTCCAGCCAG CACTGCTTGCCCGTTTCCAGACCGTGATTTACCGTCCGCTGACACCGTCTGCTATGCGCACCATTGTGGAGATGAAGCTT GCACAGGTCTGCGAACGCCTGCACTGCCATTATGGGCTGAGCACATCGGTTGATGAACGTGTGTACGATGCCCTGACATC CGCCTGCCTGCTGCCGGATACGGGCGCCCGGAATGTGGAGAGTCTGCTGAACCAGCAACTGCTGCCGGTACTGAGCCGGC AGTTGCTGAGCCATATGGCCGCGAAGCAGAAACCGCAGGCGCTGGCTCTGGCATGGAGTGACGAAGACGGTATGGTGATT GAGCTGCGGCAGGAATGCGCGTTATGA Protein sequence : MNNMENSAALLRRLNHYCARALEGAASLCQTRAHAEITPEHWLLKLLEQGEGDLTVLGRRYDWDMDAIWQSLLGWLDNQP RSVRSRPQLAQSLNALLKQAWMVASLQGEEHIRSVHLLGALTENPHLVRCDGLWPLLTLSQSQLQRLSPLLDAQPDECPE TLQDAEPVLPQGDSVTFIGRPVGADTAGIPSGDLPPVLQGALDKFTRDITASAREGKIDPVSGRDTEIRQMVDILSRRRK NNPILVGDPGVGKTALVEGLALRIVEGNVPESLRPVTLRTLDLGLLQAGAGVKGEFEQRLKNVIDAVQLSPAPVLLFIDE AHTLIGAGNQAGGADAANLLKPALARGELRTIAATTWSEYKQYLERDAALERRFQMVKVDEPDDETACLMLRSLKSRYAE HHNVHITDEAVRAAVTLSRRYLTERQLPDKAVDLLDTAAARVRMSLDTVPEQLTRIRSQLASLGMEKQALLEDIAVGHQN HGERLSAIEQEENVLMTARDDLEQQYARECELTGELLESRSDISRQSETHHLQQALHDIQQNQPLLSVDVDVRTVAGVVA DWTGVPLSSLMKDEQTELLHLEKDIGRRVVGQDVALESIAQRLRAAKTGLTSGNGPQEVFLLVGPSGVGKTETALALADV MYGGEKSLITINLSEYQEPHTVSQLKGSPPGYVGYGQGGILTEAVRKRPYSVVLLDEVEKAHRDVLNLFYQVFDRGFMRD GEGREIDFRNTVILMTSNLGSDLLMQQLSEKPETTESELHELIRPLLRDHFQPALLARFQTVIYRPLTPSAMRTIVEMKL AQVCERLHCHYGLSTSVDERVYDALTSACLLPDTGARNVESLLNQQLLPVLSRQLLSHMAAKQKPQALALAWSDEDGMVI ELRQECAL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 2e-141 | 45 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 7e-108 | 43 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 1e-107 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| EC55989_3334 | YP_002404300.1 | chaperone clpB | VFG2084 | Protein | 3e-127 | 48 |
| EC55989_3334 | YP_002404300.1 | chaperone clpB | VFG2076 | Protein | 3e-158 | 44 |
| EC55989_3334 | YP_002404300.1 | chaperone clpB | VFG0079 | Protein | 2e-113 | 42 |
