Gene Information

Name : EC55989_3276 (EC55989_3276)
Accession : YP_002404247.1
Strain : Escherichia coli 55989
Genome accession: NC_011748
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 3359561 - 3359998 bp
Length : 438 bp
Strand : -
Note : Evidence 4 : Homologs of previously reported genes of unknown function

DNA sequence : 
TTGATGGATAAACCTACAGACTGGCGCTCCGGAACCCGCCGGATATTTTCTAATGAATTTAAACTTCATATGGTTGAACT
GGCTTCGAAACCAAATGCCAATGTTGCACAACTGGCCCGGGAACATGGCGTTGATAACAACCTGATTTTTAAATGGCTAC
GCCTCTGGCAAAGAGAAGGACGTATTTCTCGTAGAATGCCTCCAACTATTGTAGGCCCTACAGTATCACAATCTTTTCCG
GCCTCTCCGACTCTGGTTCCAGTGGAACTTATCGACACCCCGCGCTGTGCTACAGATGCTCCTGCTCCGGAGGCATTATC
AGTTGCTTGTGCAGCTTCCTGCCATGTGGAATTCCATTACGGTAAAATGATGCTGGAAAATCCTTCACCAGAGCTGCTCA
CGGTGTTGATCCGTGAGCTGACCGGGAGGGGACGATGA

Protein sequence : 
MMDKPTDWRSGTRRIFSNEFKLHMVELASKPNANVAQLAREHGVDNNLIFKWLRLWQREGRISRRMPPTIVGPTVSQSFP
ASPTLVPVELIDTPRCATDAPAPEALSVACAASCHVEFHYGKMMLENPSPELLTVLIRELTGRGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECUMN_3365 YP_002414038.1 putative transposase Not tested Not named Protein 3e-65 100
Z1159 NP_286694.1 hypothetical protein Not tested TAI Protein 5e-30 56
Z1598 NP_287102.1 hypothetical protein Not tested TAI Protein 5e-30 56
unnamed CAD66197.1 hypothetical protein Not tested PAI III 536 Protein 7e-25 55
unnamed CAD66191.1 hypothetical protein Not tested PAI III 536 Protein 2e-29 55
ECO103_3566 YP_003223429.1 hypothetical protein Not tested LEE Protein 2e-31 54
Z1648 NP_287151.1 hypothetical protein Not tested TAI Protein 1e-32 54
Z1208 NP_286743.1 hypothetical protein Not tested TAI Protein 1e-32 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EC55989_3276 YP_002404247.1 transposase VFG1738 Protein 9e-66 100
EC55989_3276 YP_002404247.1 transposase VFG1672 Protein 3e-25 55
EC55989_3276 YP_002404247.1 transposase VFG1666 Protein 7e-30 55