|
Name : EC55989_3274 (EC55989_3274) Accession : YP_002404245.1 Strain : Escherichia coli 55989 Genome accession: NC_011748 Putative virulence/resistance : Unknown Product : transposase ORF1, IS66 family Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3436 EC number : - Position : 3357615 - 3359183 bp Length : 1569 bp Strand : - Note : Evidence 4 : Homologs of previously reported genes of unknown function DNA sequence : ATGAGTCAGAAATACCTCATTCGCATCGCTGAGCTGGAAAGGCTGCTCTCTGAGCAGGCTGAAGCCCTCCGTCAGAAAGA CCAGCAACTGAGTCTGGTTGAAGAGACGGAGGCCTTCCTGCGCTCTGCACTGGCACGTGCCGAAGAAAAGATCGAAGAAG ATGAACGGGAAATAGAGCATCTGCGGGCTCAGATAGAAAAACTGCGCCGGATGCTGTTCGGAACCCGTTCTGAAAAACTG CGTCGTGAGGTTGAACAGGCTGAAGCCCTGCTGAAACAACGCGAGCAGGAAAGCGATCGTTACAGTGGGCGTGAGGATGA CCCGCTGGTTCCCCGCCAGTTGCGACAGTCGCGCCATCGTCGTCCGTTACCGGCACATCTCCCCCGTGAAATATACCGCC TGGAGCCTGAAGAAAGCTGTTGCCCGGAGTGTGGCGGTGAGCTGGATTATCTGGGGGAAGTCAGCGCAGAACAACTGGAA CTGGTGAGCAGCGCCCTGAAAGTGATCCGCACAGAACGGGTAAAAAAAGCCTGTACAAAATGTGACTGCATCGTTGAAGC ACCGGCACCATCCCGTCCGATAGAGCGTGGTATCGCGGGCCCGGGGTTACTTGCCCGCGTGTTAACGGGAAAATACTGCG AACACCTGCCACTGTATCGTCAGAGTGAAATCTTTGCCCGCCAGGGTGTCGAACTGAGCCGTGCCTTACTCTCCAACTGG GTTGATGCGTGCTGCCAGTTAATGACGCCGCTGAATGATGCCCTGTACAGTTATGTGATGAACACCCGCAAGGTTCACAC TGATGACACACCAGTAAAAGTACTGGCACCGGGCAGGAAGAAGGCGAAAACAGGATATATCTGGACGTATGTCCGGGATG ACCGAAATGCCGGTTCGCCAGAACCTCCGGCGGTCTGGTTCGCCTACTCACCGGACCATCAGGGTAAACATCCGGAGCAA CACCTTCGTCCCTTCCGGGGTATCCTGCAGGCAGATGCGTTCGCAGGTTACGATCGGCTGTTCAGTGCCGAACGTGAAGG CGGCGCGTTGACGGAAGCAGGATGCTGGGCTCATGCGCGGCGCAAAATCCACGATGTATATATCAGTACCAAAAGCGCGA CGGCGGAAGAAGCACTGAAACTAATCGGCGAACTGTACGCCATTGAGCACGAAATACGCGGGTTGCCGGTGTCTGAACGC CTGGCGGTCAGGCAAATGCAGAGTAAACCGCTACTGACTTCCCTGTATAAGCTGATGCAGGAGAAAGAACACACGTTATC GAAAAAATGCCGTCTGAGAGATGCGTTCCGGTATATCAGGAAGCACTGGGTTGCGTTGTGCAACTTCTGTGATGACGGTC TGGCGGAGGCGGACAATAACACAGCGGAAAGAGCGCTTCGTGCAGTCTGTCTCGGAAAGAAAAATTCTTATGACCTTTGT CAAATATTAAGCCCAAAAAGACCTTACGCAGCTCCGGGAGCTTCGTTATATCGCGGATTAAAGAACCTGAAACAGTCAGA CTGTATCTTGGATTTTACAAACTCTTATTCGGGGATTTTAGCCCCATGA Protein sequence : MSQKYLIRIAELERLLSEQAEALRQKDQQLSLVEETEAFLRSALARAEEKIEEDEREIEHLRAQIEKLRRMLFGTRSEKL RREVEQAEALLKQREQESDRYSGREDDPLVPRQLRQSRHRRPLPAHLPREIYRLEPEESCCPECGGELDYLGEVSAEQLE LVSSALKVIRTERVKKACTKCDCIVEAPAPSRPIERGIAGPGLLARVLTGKYCEHLPLYRQSEIFARQGVELSRALLSNW VDACCQLMTPLNDALYSYVMNTRKVHTDDTPVKVLAPGRKKAKTGYIWTYVRDDRNAGSPEPPAVWFAYSPDHQGKHPEQ HLRPFRGILQADAFAGYDRLFSAEREGGALTEAGCWAHARRKIHDVYISTKSATAEEALKLIGELYAIEHEIRGLPVSER LAVRQMQSKPLLTSLYKLMQEKEHTLSKKCRLRDAFRYIRKHWVALCNFCDDGLAEADNNTAERALRAVCLGKKNSYDLC QILSPKRPYAAPGASLYRGLKNLKQSDCILDFTNSYSGILAP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| Z1600 | NP_287104.1 | hypothetical protein | Not tested | TAI | Protein | 2e-170 | 90 |
| Z1161 | NP_286696.1 | hypothetical protein | Not tested | TAI | Protein | 2e-170 | 90 |
| Z4340 | NP_289564.1 | hypothetical protein | Not tested | OI-122 | Protein | 1e-150 | 90 |
| tnp | AEA34687.1 | IS66 family transposase | Not tested | Not named | Protein | 3e-144 | 87 |
| unnamed | AAC31494.1 | L0015 | Not tested | LEE | Protein | 3e-110 | 63 |
| unnamed | ACU09439.1 | IS66 family element transposase | Not tested | LEE | Protein | 3e-110 | 63 |
| Z4337 | NP_289562.1 | hypothetical protein | Not tested | OI-122 | Protein | 5e-110 | 63 |
| Z5098 | NP_290249.1 | prophage-associated protein | Not tested | LEE | Protein | 5e-110 | 63 |
| tnp | AEA34686.1 | transposase | Not tested | Not named | Protein | 7e-110 | 63 |
| ECs4547 | NP_312574.1 | hypothetical protein | Not tested | LEE | Protein | 4e-110 | 63 |
| unnamed | AAL08460.1 | unknown | Not tested | SRL | Protein | 9e-98 | 63 |
| st57 | CAC81895.1 | ST57 protein | Not tested | LEE II | Protein | 2e-105 | 62 |
| Z1131 | NP_286666.1 | hypothetical protein | Not tested | TAI | Protein | 3e-109 | 62 |
| Z1570 | NP_287074.1 | hypothetical protein | Not tested | TAI | Protein | 3e-109 | 62 |
| unnamed | CAC39285.1 | hypothetical protein | Not tested | LPA | Protein | 4e-110 | 62 |
| unnamed | CAI43806.1 | hypothetical protein | Not tested | LEE | Protein | 2e-109 | 62 |
| unnamed | AAL57570.1 | unknown | Not tested | LEE | Protein | 6e-110 | 62 |
| aec53 | AAW51736.1 | Aec53 | Not tested | AGI-3 | Protein | 2e-84 | 54 |
| BCAM0248 | YP_002232880.1 | putative transposase | Not tested | BcenGI11 | Protein | 1e-76 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| EC55989_3274 | YP_002404245.1 | transposase ORF1, IS66 family | VFG1736 | Protein | 0.0 | 99 |
| EC55989_3274 | YP_002404245.1 | transposase ORF1, IS66 family | VFG0793 | Protein | 2e-110 | 63 |
| EC55989_3274 | YP_002404245.1 | transposase ORF1, IS66 family | VFG1051 | Protein | 5e-98 | 63 |
