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Name : EC55989_3146 (EC55989_3146) Accession : YP_002404125.1 Strain : Escherichia coli 55989 Genome accession: NC_011748 Putative virulence/resistance : Virulence Product : Type III secretion protein EpaR Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4791 EC number : - Position : 3218508 - 3219275 bp Length : 768 bp Strand : - Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 12791847; Product type pm : membrane component DNA sequence : ATGGAGGAGGCGATACTCTATCAGTTGCATAGTCTGCTGGCTGCTACAGCGCTCGGTTTTTGCCGATTGGCACCAACTTT CTATTTGTTACCATTTTTCGCCAGTGGGAATATACCAACAGTAGTCCGTCATCCAATAATAATAGTGGTATCATGTGCAT TATTTCAGCATTACCACTATGAATTATCGACCTTAAATGAAATCGATATCGCTTTGTTTGCTGCCAGAGAAATTATCATA GGGCTGTTCATTGCTTGCTTATTATCATCCCCGTTTTGGATTTTCCTTGCTATAGGTAGTTTTATCGATAACCAACGTGG TGCAACGTTAAGTAGTACTTTGGATCCTGCTACTGGTGTCGATACTTCGGAATTAGCAAGATTATTTAACCTATTCTCTG CAGCGGTTTATCTTACTAACGGTGGATTGAACTTTATTCTGGAAACTCTTTGGCAAAGTTATAATTTATGGCCTTCAGGC AATTTTAATTTTCCTAAATTAGAGCCTTTATTCTCATATATTAATAACATAATGACTCATACTATCGTTTACGCAAGCCC CGTGATTGCCGTTATGCTGGGCGGTGAGGCTGTCCTGGGATTGCTGGCACGTTATGCTTCACAACTAAATGCTTTTGCCA TTTCACTGACTGTCAAAAGTGCGCTGGCATTTTTAATATTAATTATTTATTTTGGCCCAATACTGGCTGAACGAGTAATG CCGTTATCCTTTTTCCCAGAACAATTGCAACTATACATTGAGAAATAG Protein sequence : MEEAILYQLHSLLAATALGFCRLAPTFYLLPFFASGNIPTVVRHPIIIVVSCALFQHYHYELSTLNEIDIALFAAREIII GLFIACLLSSPFWIFLAIGSFIDNQRGATLSSTLDPATGVDTSELARLFNLFSAAVYLTNGGLNFILETLWQSYNLWPSG NFNFPKLEPLFSYINNIMTHTIVYASPVIAVMLGGEAVLGLLARYASQLNAFAISLTVKSALAFLILIIYFGPILAERVM PLSFFPEQLQLYIEK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| epaR | AAZ31291.1 | EpaR | Virulence | ETT2 | Protein | 6e-84 | 100 |
| spaR | NP_457282.1 | secretory protein (associated with virulence) | Virulence | SPI-1 | Protein | 1e-41 | 48 |
| spaR | NP_806491.1 | virulence-associated secretory protein | Virulence | SPI-1 | Protein | 1e-41 | 48 |
| spaR | NP_461809.1 | needle complex export protein | Virulence | SPI-1 | Protein | 5e-42 | 48 |
| spaR | YP_217807.1 | surface presentation of antigens; secretory proteins | Virulence | SPI-1 | Protein | 1e-40 | 47 |
| spaR | AAS66867.1 | SpaR | Not tested | SSR-2 | Protein | 5e-31 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| EC55989_3146 | YP_002404125.1 | Type III secretion protein EpaR | VFG0549 | Protein | 2e-42 | 48 |
| EC55989_3146 | YP_002404125.1 | Type III secretion protein EpaR | VFG1014 | Protein | 1e-35 | 43 |
