|
Name : EC55989_1588 (EC55989_1588) Accession : YP_002402664.1 Strain : Escherichia coli 55989 Genome accession: NC_011748 Putative virulence/resistance : Unknown Product : VgrG protein, Encoded within repeats that are hotspots for chromosomal duplication formation; Function of protein is unknown Function : - COG functional category : S : Function unknown COG ID : COG3501 EC number : - Position : 1637768 - 1639912 bp Length : 2145 bp Strand : + Note : Evidence 4 : Homologs of previously reported genes of unknown function DNA sequence : ATGTGCGGATTATTATTCATTTTCACGGAGGTTGCTATGTCAACCGGATTACGTTTCACACTGGAAGTGGACGGCCTGCC GCCGGATGCTTTTGCGGTGGTTTCCTTTCATCTGAACCAGTCACTCTCTTCGCTCTTTTCCCTCGATCTCTCCCTGGTCA GCCAGCAGTTTCTCTCCCTTGAATTTGCGCAGGTGCTGGACAAAATGGCCTACCTGACGATATGGCAGGGCGATGAAGTA CAGCGCCGGGTGAAAGGCGTGGTGACCTGGTTTGAACTCGGGGAGAACGACAAAAACCAGATGCTGTACAGCATGAAGGT GCACCCGCCGCTGTGGCGTGCCGGTCTGCGCCAGAACTTCCGTATCTTCCAGAACGAGGACATCAAAAGCATCCTCGGCA CGATGTTGCAGGAAAACGGGGTGACCGAATGGAGTCCGCTGTTCAGCGAGCCGCATCCTTCCCGTGAGTTTTGTGTCCAG TACGGTGAGACTGATTACGATTTCCTGTGCCGGATGGCGGCGGAGGAAGGCATCTTCTTTTATGAGGAGCATGCTTACAA AAGTACCGACCAGAGCCTGGTGCTGTGCGACACAGTCCGCCATCTGCCCGAATCTTTTGAAATCCCATGGAACCCGAACA CCCGTACCGAGGTGAGCACCCTCTGCATCAGCCAGTTCCGCTACAGCGCACAAATCCGCCCTTCTTCCGTGGTGACCAAA GACTACACCTTTAAACGCCCCGGCTGGGCCGGACGTTTTGATCAGGAAGGCCAGCACCAGGATTACCAGCGCACACAGTA TGAAGTGTATGACTACCCCGGACGTTTCAAGGGGGCCCACGGGCAGAACTTTGCCCGCTGGCAGATGGATGGCTGGCGAA ACAACGCCGAAGTGGCGCGCGGAACAAGCCGTTCTCCGGAGATATGGCCGGGACGGCGAATTGCGCTGACGGGGCATCCG CAGGCGAACCTGAACCGGGAATGGCAGGTGGTGGCGAGCGATCTTCACGGCGAACAGCCGCAGGCGGTACCGGGACGCAG TGGTTCAGGCACCACGCTGAATAATCACTTTGCGGTGATCCCGGCAGACAGAACATGGCGACCACAGCCGTTGCTGAAAC CGCTGGTGGACGGCCCGCAGAGCGCTGTCGTGACGGGACCGGCAGGCGAGGAAATCTTCTGTGATGAACATGGCCGCGTG CGGGTGAAATTTAACTGGGACCGTTATAACCCGTCAAACCAGGACAGTTCATGCTGGAGCCGTGTGGCACAGGCGTGGGC AGGCACCGGATTCGGTAACCTGGCGATACCGCGTGTGGGTCAGGAGGTGATTGTGGACTTCCTCAACGGCGATCCGGACC AGCCGATCATTTTGGGGCGCACCTACCACCAGGAAAACCGCACACCCGGCAGCCTGCCGGGAACAAAGACGCAGATGACC ATTCGTTCGAAAACCTATAAGGGCAGCGGGTTTAATGAACTGAAGTTTGACGATGCGACAGGGAAAGAACAGGTCTACAA CCACGCGCAGAAGAACATGAACACCGAGGTGCTGAATAACCGCACCACTGATGTGATAAACAACCATGCTGAAACCATTG GCAACAATCAGATGATTGCGGTTACCAACAATCAGATACAGACGGTGGGTGTTAACCAGATAGAGACGGTGGGCAGTAAC CAGATAATTAAAGTGGGTTCTGTTCAGGTGGAAACGATTGGACTTGTTCGTGCGCTGACCGTGGGCGTGGCGTATCAGAC GACGGTAGGTGGCATTATGAACACCTCGGTGGCACTGATGCAGTCCTCGCAGATGGGTTTGCATAAATCGTTGAGGGTCG GGCTGGGTTATGACGTCAAAGTCGGAAATAACGTTACCTTCACCGTTGGTAAAACGAAAAAGGATGATACCGGGCAGACC GCGATTTACTCCGCCGGTGAGCATCTGGAGCTCTGCTGTGGTAAGGCAAGGCTGGTGCTGACGAAGGACGGACAAATTTT TCTCAACGGCACAAAAATTCATTTGCAGGGTAAGGAGCAGGTTAATGGTGACTCACTGTTGATTAACTGGAACTGTGCAG CCTCGAAATCCCCACCGAAGACCCCTGATGAAAAGCAGGATACGCCGGATATGAGAGAGTACTGA Protein sequence : MCGLLFIFTEVAMSTGLRFTLEVDGLPPDAFAVVSFHLNQSLSSLFSLDLSLVSQQFLSLEFAQVLDKMAYLTIWQGDEV QRRVKGVVTWFELGENDKNQMLYSMKVHPPLWRAGLRQNFRIFQNEDIKSILGTMLQENGVTEWSPLFSEPHPSREFCVQ YGETDYDFLCRMAAEEGIFFYEEHAYKSTDQSLVLCDTVRHLPESFEIPWNPNTRTEVSTLCISQFRYSAQIRPSSVVTK DYTFKRPGWAGRFDQEGQHQDYQRTQYEVYDYPGRFKGAHGQNFARWQMDGWRNNAEVARGTSRSPEIWPGRRIALTGHP QANLNREWQVVASDLHGEQPQAVPGRSGSGTTLNNHFAVIPADRTWRPQPLLKPLVDGPQSAVVTGPAGEEIFCDEHGRV RVKFNWDRYNPSNQDSSCWSRVAQAWAGTGFGNLAIPRVGQEVIVDFLNGDPDQPIILGRTYHQENRTPGSLPGTKTQMT IRSKTYKGSGFNELKFDDATGKEQVYNHAQKNMNTEVLNNRTTDVINNHAETIGNNQMIAVTNNQIQTVGVNQIETVGSN QIIKVGSVQVETIGLVRALTVGVAYQTTVGGIMNTSVALMQSSQMGLHKSLRVGLGYDVKVGNNVTFTVGKTKKDDTGQT AIYSAGEHLELCCGKARLVLTKDGQIFLNGTKIHLQGKEQVNGDSLLINWNCAASKSPPKTPDEKQDTPDMREY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec15 | YP_851429.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 5e-165 | 55 |
| aec15 | AAQ96709.1 | Aec15 | Not tested | AGI-1 | Protein | 3e-165 | 55 |
| vgrG | AAN64196.1 | VgrG | Not tested | macrophage toxin pathogenicity island | Protein | 5e-131 | 48 |
