Gene Information

Name : ecpD (EC55989_0134)
Accession : YP_002401273.1
Strain : Escherichia coli 55989
Genome accession: NC_011748
Putative virulence/resistance : Virulence
Product : chaperone protein EcpD
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 155555 - 156295 bp
Length : 741 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 93352405, 8102362, 15561151; Product type f : factor

DNA sequence : 
ATGTTTTTTAACACCAAACATACAACAGCTTTATGCTTCGTAACCTGTATGGCTTTTAGTTCATCGTCTATTGCGGACAT
TGTCATTTCGGGTACTCGCGTAATATATAAAAGCGATCAAAAAAGTGTCAACGTACGTCTGGAAAATAAAGGGAATAACC
CGTTGCTTGTCCAGAGTTGGTTAGATACTGGCGATGACAACGCTGAGCCTGGCAGTATTACAGTCCCTTTTACTGCCACG
CCGCCAGTATCGCGTATTGATGCCAAACGTGGGCAAACAATCAAATTAATGTACACAGCCAGCACCTCACTGCCTAAAGA
CAGAGAGAGCGTGTTCTGGTTTAACGTACTGGAAGTTCCACCAAAACCAGATGCAGAAAAGGTCGCGAATCAAAGTCTGC
TGCAACTGGCATTTCGCACACGTATAAAACTTTTCTATCGCCCGGATGGATTGAAGGGAAATCCCTCTGAAGCCCCGTTA
GCCCTGAAGTGGTTCTGGTCAGGTTCAGAAGGTAAGGCGTCATTGCGAGTGACCAATCCAACCCCTTACTACGTCTCTTT
TAGCAGTGGTGATTTAGAAGCTAGCGGTAAACGCTATCCGATTGATGTGAAAATGATTGCACCATTTAGTGATGAGGTCA
TGAAAGTCACTGGCCTTAATGGCAAAGCAAGTTCTGCAAAAGTACATTTTTACGCCATTAATGATTTTGGTGGCGCCATT
GAAGGTAATGCCAGTCTGTAA

Protein sequence : 
MFFNTKHTTALCFVTCMAFSSSSIADIVISGTRVIYKSDQKSVNVRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTAT
PPVSRIDAKRGQTIKLMYTASTSLPKDRESVFWFNVLEVPPKPDAEKVANQSLLQLAFRTRIKLFYRPDGLKGNPSEAPL
ALKWFWSGSEGKASLRVTNPTPYYVSFSSGDLEASGKRYPIDVKMIAPFSDEVMKVTGLNGKASSAKVHFYAINDFGGAI
EGNASL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ecpD1 AAO49832.1 pilin chaperone ecpD1 Not tested SPI-3 Protein 9e-64 61
unnamed CAD33727.1 putative F17-like fimbrial chaperone Virulence PAI I 536 Protein 8e-42 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ecpD YP_002401273.1 chaperone protein EcpD VFG1145 Protein 3e-39 44
ecpD YP_002401273.1 chaperone protein EcpD VFG1468 Protein 5e-42 42
ecpD YP_002401273.1 chaperone protein EcpD VFG0007 Protein 3e-41 42