Gene Information

Name : FI (ECED1_0870)
Accession : YP_002396896.1
Strain : Escherichia coli ED1a
Genome accession: NC_011745
Putative virulence/resistance : Unknown
Product : major tail sheath protein FI from bacteriophage
Function : -
COG functional category : R : General function prediction only
COG ID : COG3497
EC number : -
Position : 910723 - 911910 bp
Length : 1188 bp
Strand : +
Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 1825255; Product type h : extrachromosomal origin

DNA sequence :
ATGGCTGAAACCCGTTTCCATGGCGTGCGGGTCCGGGAGAATGCGGATCTGGTCACGGCCATTAATGATATTGACTCCAG
TGTGATTGGTATCGTGGCTGTTGCTGATGATGCTGATGCAAAAACATTTCCGCTGGATAAGCCGGTGCTCCTGACGCGCG
TTATGGATGTGCTGGGTAAGGCCGGGAAAACCGGCACGCTGTACAAAAGTCTGAAAGCTATTGCCGATCAGGTCAGCACC
AGAGTTGTTGTGGTGCGGGTTGCTGCTGCGAAGGAGGGGGATGGTCAGCCGACACAAACGCAGCTTGTTATTGGTGAGGT
CAAAAATGACGGAACCTATACAGGCATGCAGGCGCTCCTGGTGGCTGAACAGAATGAGGCTGTTGGTGTTCGTCCCAGGA
TCCTGGCCGTGCCATCGCTTGACACCAAAGAGGTGGTGGCGGCACTGGTAACCGTCGCGAAAAAGCTGCGTGCCTTTGTG
TATGCGGGCTGTCCCGGCTGTAATACCGTGCAGGAGGCTGTTACCTGGCGCGCCGATCTTGCTCACCGTGAAGTTATGCT
GATCTGGCCTGATTTTATCGCGTACAACCCTAACAGTGGCCAGAATGAGGCTTTTCCTGCATCTGCGTATGCGTGCGGGT
TGCGTGCGAAGATTGACCACGAGCAGGGCTGGCATAAATCCCTGTCCAATGTGGCAGTGAATAATGTCCTGGGTATTTCT
GTGCCGGTGTTCTGGTCGCTCCAGGCAGAGGACAGTGACGCGGAAACCCTCAATGACAAGGAGATCACCACACTCATTAA
ACGTAACGGCTTCCGTTTCTGGGGTAACCGGACTCTCGACACCACTACCTACACCTTTGAGACCTACACGCGTACGGCGC
AGTCGCTGGCGGATACCATCGCCGAATCGCAGTTTGAAACCGTGGACAAGCCGCTGACGCCGTCGAACGTGAAGGATGTG
TTAAGCGATATCCGGGCAAAACTGAGTGCCCTTGTGACAGCGGGTAAACTTATCGGGGCAGAGTGCTGGTATGACGTGGT
GGATAACGGCACAACGGATCTGCGTCAGGGGATTGTGCGGATCCGCTACAGATATACGCCGGTACCACCGCTTGAAGATC
TGGAGCTTCACCAGACGTTTACTGATGAGTTCTTTGACGGTGCATTTGCATCACTGGGAGGTGAGTAA

Protein sequence :
MAETRFHGVRVRENADLVTAINDIDSSVIGIVAVADDADAKTFPLDKPVLLTRVMDVLGKAGKTGTLYKSLKAIADQVST
RVVVVRVAAAKEGDGQPTQTQLVIGEVKNDGTYTGMQALLVAEQNEAVGVRPRILAVPSLDTKEVVAALVTVAKKLRAFV
YAGCPGCNTVQEAVTWRADLAHREVMLIWPDFIAYNPNSGQNEAFPASAYACGLRAKIDHEQGWHKSLSNVAVNNVLGIS
VPVFWSLQAEDSDAETLNDKEITTLIKRNGFRFWGNRTLDTTTYTFETYTRTAQSLADTIAESQFETVDKPLTPSNVKDV
LSDIRAKLSALVTAGKLIGAECWYDVVDNGTTDLRQGIVRIRYRYTPVPPLEDLELHQTFTDEFFDGAFASLGGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13484.1 putative tail sheath protein Not tested PAGI-6 Protein 8e-70 52
STY4607 NP_458690.1 probable major tail sheath protein Not tested SPI-7 Protein 4e-69 49
t4301 NP_807898.1 major tail sheath protein Not tested SPI-7 Protein 4e-69 49