Gene Information

Name : fepD (ECED1_0587)
Accession : YP_002396628.1
Strain : Escherichia coli ED1a
Genome accession: NC_011745
Putative virulence/resistance : Virulence
Product : iron-enterobactin transporter membrane protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 610011 - 611015 bp
Length : 1005 bp
Strand : -
Note : with FepBCG is involved in the transport of ferric enterobactin

DNA sequence :
ATGTCTGGTTCTGTTGCCGTGACACGCGCCATTGCCGTGCCCGGATTGCTGTTATTACTGATTATCGCGACGGCATTAAG
CCTACTCATTGGGGCAAAATCACTCCCCGCCTCCGTAGTGCTGGAGGCGCTCTCCGGCACCTGCCAGAGCGCCTCCAGCA
CCATTGTGCTCGACGCCCGTCTGCCGCGCACCCTTGCCGGTTTACTGGCAGGCGGTGCGCTTGGCCTTGCCGGGGCGTTA
ATGCAAACCCTCACCCGAAACCCGCTTGCCGATCCTGGTTTGCTTGGCGTGAACGCCGGTGCCAGTTTTGCCATTGTGCT
GGGCGCGGCGCTGTTTGGTTACTCTTCCGCGCAGGAGCAACTGGCGATGGCCTTCGCCGGGGCGCTGGTGGCCTCGTTGA
TTGTTGCCTTTACCGGCAGCCAGGGCGGCGGGCAGTTAAGTCCGGTGCGTTTAACCCTAGCGGGCGTGGCGCTGGCGGCG
GTGCTGGAAGGGCTGACCAGCGGCATCGCCCTGCTTAATCCCGACGTCTACGATCAACTGCGTTTCTGGCAAGCCGGTTC
GCTGGATATTCGCAATCTACATACCTTAAAAGTGGTGCTAATCCCGGTGCTTACCGCTGGAGCAACTGCGCTATTACTGA
GCCGCGCGCTGAACAGTTTAAGCCTTGGCAGTGACACCGCGACGGCACTGGGCAGTCGCGTAGCGCGCACACAGTTGATT
GGTCTGCTGGCAATTACCGTGCTTTGTGGTAGTGCGACGGCGGTAGTTGGCCCGATTGCCTTTATTGGCCTGATGATGCC
GCACATGGCGCGCTGGCTGGTAGGTGCCGATCATCGCTGGTCGCTGCCCGTCACGCTACTCGCTACCCCTGCCCTGCTGC
TGTTTGCCGATATCATTGGGCGGGTGATTGTTCCCGGCGAACTGCGCGTTTCTGTAGTCAGTGCCTTTATTGGCGCACCA
GTGCTGATCTTCCTCGTACGACGTAAAACGCGAGGTGGCGCATGA

Protein sequence :
MSGSVAVTRAIAVPGLLLLLIIATALSLLIGAKSLPASVVLEALSGTCQSASSTIVLDARLPRTLAGLLAGGALGLAGAL
MQTLTRNPLADPGLLGVNAGASFAIVLGAALFGYSSAQEQLAMAFAGALVASLIVAFTGSQGGGQLSPVRLTLAGVALAA
VLEGLTSGIALLNPDVYDQLRFWQAGSLDIRNLHTLKVVLIPVLTAGATALLLSRALNSLSLGSDTATALGSRVARTQLI
GLLAITVLCGSATAVVGPIAFIGLMMPHMARWLVGADHRWSLPVTLLATPALLLFADIIGRVIVPGELRVSVVSAFIGAP
VLIFLVRRKTRGGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 4e-27 47
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 4e-27 47
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 4e-27 47
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 4e-27 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fepD YP_002396628.1 iron-enterobactin transporter membrane protein VFG0926 Protein 1e-101 99