Gene Information

Name : ECED1_5190 (ECED1_5190)
Accession : YP_002400923.1
Strain : Escherichia coli ED1a
Genome accession: NC_011745
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5118088 - 5118330 bp
Length : 243 bp
Strand : +
Note : Evidence 4 : Homologs of previously reported genes of unknown function

DNA sequence :
ATGCCTGCCGGGTTTACCCACTTTCAACTGGTAACCAGGAACAACATGAAATCATTAACCACGGAAACCGCACTGGATAT
TCTGATTGCGTGGCTGCAGGACAATATCGACTGCGAATCGGGAATTATCTTTGACAACAATGAGGATAAAACGGATTCAG
CAGCACTGTTGCCCTGTATCGAACAGGCCAGAGAGGATATCCGTACCCTGCGCCAACTGCAGCTTCAGCACCAGAACCGG
TGA

Protein sequence :
MPAGFTHFQLVTRNNMKSLTTETALDILIAWLQDNIDCESGIIFDNNEDKTDSAALLPCIEQAREDIRTLRQLQLQHQNR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAI43850.1 hypothetical protein Not tested LEE Protein 9e-32 100
unnamed ADD91697.1 hypothetical conserved protein Not tested PAI-I AL862 Protein 2e-31 99
aec78 AAW51761.1 Aec78 Not tested AGI-3 Protein 7e-26 98
ECO103_3594 YP_003223451.1 hypothetical protein Not tested LEE Protein 1e-22 96
unnamed CAI43905.1 hypothetical protein Not tested LEE Protein 2e-25 96
unnamed AAL57573.1 unknown Not tested LEE Protein 9e-25 95
ECO111_3780 YP_003236115.1 hypothetical protein Not tested LEE Protein 1e-22 94
z1225 CAD33791.1 Z1225 protein Not tested PAI I 536 Protein 3e-29 93
unnamed AAK00484.1 unknown Not tested SHI-1 Protein 2e-21 93
unnamed CAE85206.1 hypothetical protein Not tested PAI V 536 Protein 1e-29 93
unnamed AAL08480.1 unknown Not tested SRL Protein 2e-22 93
SF3001 NP_708775.1 hypothetical protein Not tested SHI-1 Protein 3e-21 93
Z1225 NP_286759.1 hypothetical protein Not tested TAI Protein 2e-22 93
unnamed CAD66209.1 hypothetical protein Not tested PAI III 536 Protein 4e-29 93
Z1663 NP_287165.1 hypothetical protein Not tested TAI Protein 8e-30 93
unnamed AAL67387.1 L0009-like protein Not tested PAI II CFT073 Protein 3e-22 91
c5147 NP_756995.1 hypothetical protein Not tested PAI II CFT073 Protein 4e-22 91
unnamed CAD42103.1 hypothetical protein Not tested PAI II 536 Protein 3e-27 88

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECED1_5190 YP_002400923.1 hypothetical protein VFG1532 Protein 1e-29 93
ECED1_5190 YP_002400923.1 hypothetical protein VFG1071 Protein 7e-23 93
ECED1_5190 YP_002400923.1 hypothetical protein VFG1684 Protein 2e-29 93
ECED1_5190 YP_002400923.1 hypothetical protein VFG0665 Protein 9e-22 93
ECED1_5190 YP_002400923.1 hypothetical protein VFG1622 Protein 1e-27 88