Gene Information

Name : ECED1_5176 (ECED1_5176)
Accession : YP_002400910.1
Strain : Escherichia coli ED1a
Genome accession: NC_011745
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3596
EC number : -
Position : 5106557 - 5107468 bp
Length : 912 bp
Strand : +
Note : Evidence 4 : Homologs of previously reported genes of unknown function

DNA sequence :
GTGCGCGGGGTTTTGTCTTTTTTCACCGGGAATACATGTATGAATCCGTCTGATGCCATTGAGGCAATTGAAAAACCGCT
CTCCTCCCTGCCTTACTCGCTTTCCCGTCACATCCTGGAACATCTGCGCAAACTCACCCGTCACGAGCCCGTGATTGGCA
TTATGGGTAAAAGCGGGGCCGGTAAATCTTCACTCTGTAATGCCCTGTTTCAGGGGGAGATCACACCGGTCAGTGATGTT
CACGCCGGCACCCGGGAAGTGCAGCGCTTCCGTCTGAGTGGTCACGGTTACAGCATGGTTATCACTGACCTGCCCGGGGT
GGGCGAGAGCCGGGACAGGGATGCAGAGTATGAAGCCCTGTACCGTGACATTCTGCCTGAACTGGACCTGGTGCTGTGGC
TGATTAAAGCCGATGACCGGGCCCTGTCTGTGGATGAGTATTTCTGGCGACACATCCTGCAGTGCGGACATCAGCAGGTG
CTGTTTGTGGTGACACAGGCCGACAAAACGGAGCCCTGCCATGAATGGGATATGGCCGGCATTCAGCCCTCTCCCGCACA
GGCACAGAACATTCGCGAAAAAACGGAGGCGGTATTCCGTCTGTTCCGGCCTGTACATCCGGTTGTGGCCGTATCGGCCC
GCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACC
CGCCTGCAGGACGAGCTGCGCACGGAATCTGTCCGCGCTCAGGCCCGTGAGCAGTTTACCGGTGCGGTGGACCGGATATT
TGACACAGCGGAGAGCGTCTGTGTTGCCTCTGTTGCACGCACGGTTCTGCGTGCCGTCCGTGACACAGTGGTCTCTGTTG
CCCGCGCGGTATGGAACTGGATCTTCTTCTGA

Protein sequence :
MRGVLSFFTGNTCMNPSDAIEAIEKPLSSLPYSLSRHILEHLRKLTRHEPVIGIMGKSGAGKSSLCNALFQGEITPVSDV
HAGTREVQRFRLSGHGYSMVITDLPGVGESRDRDAEYEALYRDILPELDLVLWLIKADDRALSVDEYFWRHILQCGHQQV
LFVVTQADKTEPCHEWDMAGIQPSPAQAQNIREKTEAVFRLFRPVHPVVAVSARTGWELDTLVSALMTALPDHAASPLMT
RLQDELRTESVRAQAREQFTGAVDRIFDTAESVCVASVARTVLRAVRDTVVSVARAVWNWIFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec64 AAW51747.1 Aec64 Not tested AGI-3 Protein 5e-138 98
sap NP_708764.1 hypothetical protein Not tested SHI-1 Protein 8e-132 98
yeeP ADD91709.1 YeeP Not tested PAI-I AL862 Protein 5e-138 98
sap NP_838477.1 hypothetical protein Not tested SHI-1 Protein 3e-132 98
unnamed CAD66199.1 hypothetical protein Not tested PAI III 536 Protein 6e-131 98
unnamed AAL08471.1 unknown Not tested SRL Protein 9e-132 98
unnamed AAK00473.1 unknown Not tested SHI-1 Protein 6e-132 98
ECO103_3582 YP_003223441.1 hypothetical protein Not tested LEE Protein 7e-131 97
APECO1_1093 YP_853113.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 6e-136 97
unnamed AAL99256.1 unknown Not tested LEE Protein 5e-132 97
Z1210 NP_286745.1 histone Not tested TAI Protein 3e-128 96
Z1650 NP_287153.1 hypothetical protein Not tested TAI Protein 3e-128 96
yeeP CAE85196.1 YeeP protein Not tested PAI V 536 Protein 2e-136 96

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECED1_5176 YP_002400910.1 hypothetical protein VFG1674 Protein 4e-131 98
ECED1_5176 YP_002400910.1 hypothetical protein VFG0654 Protein 4e-132 98
ECED1_5176 YP_002400910.1 hypothetical protein VFG1062 Protein 5e-132 98