Gene Information

Name : ECED1_5173 (ECED1_5173)
Accession : YP_002400907.1
Strain : Escherichia coli ED1a
Genome accession: NC_011745
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5103374 - 5103973 bp
Length : 600 bp
Strand : +
Note : Evidence 4 : Homologs of previously reported genes of unknown function

DNA sequence : 
TTGCTGCGTGCTAAAGGAGAGAATATTATGCAAAAACTTGAAAACCGGTGTGATCTGCTGCTCACCCAGCATCAGAAATG
GATGGCAAGTGTAACCCGGTTTATTGTCGCTCACGGAATGGGCTCTCCGCATCTTCATGGTTATCATCGCCTGACCCTGG
CCCACTTTTTTCTGCCGGAAAAAGGCACCATCATCTCGGTGGCACCACAGGGACTCTATCAGGTAGTCAACCCGGCAACG
CCACCGTTCATTCCTGCCATTCAGGAAGGGTTAATGACCAGCATTCAGACTCATGAAATCATGTTACTTACACATTTTAA
CCTGGGTGGTGTTTTACTCAGTGAACTACATCGTCTGGGAGAAAGCCGACTGGCAAACAGGCTGAACAGTCTGCTCCGGC
GTTTTGACGATCGCGATCTCTACCACACCCTGATATGGCTGTGCTGGTATGATCTGATGTGCGCCCACTCCATGCAGCCC
TGGACTGAAGAGTTAAAACATAAATCACACGCAGAACTTGAAAGCTGGACTGTGGCGCGCAAACGGGAAAAGCGCGAGCT
TGAACTGATGATTGACGAGTACCTGTTATACGCCTGTTGA

Protein sequence : 
MLRAKGENIMQKLENRCDLLLTQHQKWMASVTRFIVAHGMGSPHLHGYHRLTLAHFFLPEKGTIISVAPQGLYQVVNPAT
PPFIPAIQEGLMTSIQTHEIMLLTHFNLGGVLLSELHRLGESRLANRLNSLLRRFDDRDLYHTLIWLCWYDLMCAHSMQP
WTEELKHKSHAELESWTVARKREKRELELMIDEYLLYAC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK00471.1 unknown Not tested SHI-1 Protein 3e-71 96
SF2988 NP_708762.1 hypothetical protein Not tested SHI-1 Protein 3e-79 95
S3191 NP_838474.1 hypothetical protein Not tested SHI-1 Protein 3e-79 95

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECED1_5173 YP_002400907.1 hypothetical protein VFG0652 Protein 7e-80 95