Gene Information

Name : ECED1_5131 (ECED1_5131)
Accession : YP_002400874.1
Strain : Escherichia coli ED1a
Genome accession: NC_011745
Putative virulence/resistance : Unknown
Product : transposase ORF A, IS100 (fragment)
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4584
EC number : -
Position : 5070095 - 5070880 bp
Length : 786 bp
Strand : +
Note : Evidence 7 : Gene remnant; Product type pe : putative enzyme

DNA sequence :
TTGTTCGCACCTTCCATCAGAGACCAGGGATATCGTGGCGGAATGACCATTCTCAGGGCGTTCATTCGTTCTCTCTCGGT
TTCTCAGGAGCAGGAGCCTGCCGTTCGGTTCGAAACTGAACCCGGACGACAGATGCAGGTTGACTGGGGCACTATGCGTA
ATGGTCGCTCACCGCTTCACGTGTTCGTTGCTGTTCCCGGATACAGCCGAATGTTGTACATCGAATTCACTGACAATATG
CGTTATGACACGCTGGAGACCTGCCATCGTAATGCGTTCCGCTTCTTTGGTGGTGTGCCGCGCGAAGTGTTGTATGACAA
TATGAAAACTGTGGTTCTGCAACGTGACGCATATCAGACCGGTCAGCACCGGTTCCATCCTTCGCTGTGGCAGTTCGGCA
AGGAGATGGGCTTCTCTCCCCGACTGTGTCGCCCCTTCAGGGCACAGACTAAAGGTAAGGTGGAACGGATGGTGCAGTAC
ACCCGTAACAGTTTTTACATCCCACTAATGACTCGCCTGCGCCCGATGGGGATCACTGTCGATGTTGAAACAGCCAACCG
CCACGGTCTGCGCTGGCTGCACGATGTCGCTAACCAACGAAAGCATGAAACAATCCAGGCCCGTCCCTGCGATCGCTGGC
TCGAAGAGCAGCAGTCCATGCTGGCACTGCCTCCGGAGAAAAAAGAGTATGACGTGCATCCTGGTGAAAATCTGGTGAAC
TTCGATAAACACCCCCTGCATCATCCACTCTCCATCTACGACTCATTCTGCAGAGGAGTGGCGTGA

Protein sequence :
MFAPSIRDQGYRGGMTILRAFIRSLSVSQEQEPAVRFETEPGRQMQVDWGTMRNGRSPLHVFVAVPGYSRMLYIEFTDNM
RYDTLETCHRNAFRFFGGVPREVLYDNMKTVVLQRDAYQTGQHRFHPSLWQFGKEMGFSPRLCRPFRAQTKGKVERMVQY
TRNSFYIPLMTRLRPMGITVDVETANRHGLRWLHDVANQRKHETIQARPCDRWLEEQQSMLALPPEKKEYDVHPGENLVN
FDKHPLHHPLSIYDSFCRGVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
y1094 CAD66187.1 transposase Orf A, insertion element IS100 Not tested PAI III 536 Protein 6e-90 99
unnamed CAD33718.1 hypothetical protein Not tested PAI I 536 Protein 8e-98 98
y1094 CAD42088.1 OrfA protein of IS100 transposase Not tested PAI II 536 Protein 5e-124 98
orfA CAE85182.1 OrfA protein, transposase, IS100 Not tested PAI V 536 Protein 5e-124 98
y1094 CAC43410.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 5e-124 98
s0035 CAD33773.1 ORF A protein Not tested PAI I 536 Protein 5e-124 98
YPTB1585 YP_070113.1 transposase Not tested HPI Protein 8e-123 97
unnamed CAA21403.1 - Not tested HPI Protein 8e-123 97
unnamed CAB46599.1 IS100 transposase Not tested HPI Protein 6e-123 97
api83 CAF28557.1 transposase Not tested YAPI Protein 6e-123 97
y1093 CAD33720.1 ORF A protein Not tested PAI I 536 Protein 2e-123 97
y1093 YP_002346890.1 transposase for insertion sequence IS100 Not tested HPI Protein 8e-123 97
y2411 NP_669718.1 transposase Not tested HPI Protein 8e-123 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECED1_5131 YP_002400874.1 transposase ORF A, IS100 (fragment) VFG1662 Protein 4e-90 99
ECED1_5131 YP_002400874.1 transposase ORF A, IS100 (fragment) VFG1459 Protein 5e-98 98
ECED1_5131 YP_002400874.1 transposase ORF A, IS100 (fragment) VFG1626 Protein 3e-124 98
ECED1_5131 YP_002400874.1 transposase ORF A, IS100 (fragment) VFG1607 Protein 3e-124 98
ECED1_5131 YP_002400874.1 transposase ORF A, IS100 (fragment) VFG1514 Protein 3e-124 98
ECED1_5131 YP_002400874.1 transposase ORF A, IS100 (fragment) VFG1461 Protein 1e-123 97