Gene Information

Name : arcB (ECED1_5103)
Accession : YP_002400849.1
Strain : Escherichia coli ED1a
Genome accession: NC_011745
Putative virulence/resistance : Unknown
Product : ornithine carbamoyltransferase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0078
EC number : 2.1.3.3
Position : 5042060 - 5043091 bp
Length : 1032 bp
Strand : -
Note : catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway

DNA sequence :
TTGATCCATTTTTATAAGGACATCCCCATGGCTACTTCACTGAAAAACCGTAATTTTCTTAAGCTGCTTGATTACACCCC
AGCAGAGATTCAATACCTGATTGATTTGGCTATCAATCTTAAAGCCGCCAAGAAATCTGGAAACGAAAAACAAACGCTGG
TCGGTAAAAACATTGCGTTGATTTTTGAAAAATCCTCTACCCGTACCCGCTGTGCCTTTGAAGTCGCGGCCTTTGATCAA
GGTGCGCAGGTGACTTACATCGGCCCCAGCGGCTCACAAATCGGCCATAAAGAATCAATGAAAGATACCGCTCGTGTACT
CGGACGCATGTATGACGGTATTGAGTATCGCGGTTATGGTCAGAATATCGTTGAAGAATTAGGTGAGTTCGCTGGTGTTC
CGGTATGGAACGGACTGACCAATGAATTTCACCCGACACAGATCCTCGCGGATTTAATGACCATGCTGGAACATGCGCCA
GGCAAAACGCTGCCAGAGCTGAGCTTTGCGTATCTTGGTGATGCCCGAAATAACATGGGGAACTCGCTGATGGTTGGTGC
TGCAAAAATGGGGATGGATATCCGTCTGGTGGCACCGAAATCTTTCTGGCCAGATGAAGCGCTGGTAACACAATGCCGTG
AGATCGCCAGCGTGACTGGGGCGAGAATCACCCTGACAGAGAATGTGGAAGAAGGCGTATACGACGTGGATTTTCTCTAT
ACGGATGTTTGGGTTTCGATGGGAGAGCCAAAAGAAGCCTGGGCAGAACGAGTGAGTCTTATGACACCTTATCAGATCAA
TCAACAGGTGATTACTGCCACGCGTAACCCTGAAGTCAAATTTATGCACTGCCTGCCCGCCTTCCATAATGAGCACACCA
CAGTAGGACGCGAGATCGAGATGGCCTACGGCCTCAAAGGACTGGAAGTAACTGATGAGGTTTTTGAATCTGCCCACTCC
ATTGTTTTCGATGAAGCAGAAAACCGGATGCACACCATTAAAGCGGTGATGGTAGCAACTCTCGGCGACTAA

Protein sequence :
MIHFYKDIPMATSLKNRNFLKLLDYTPAEIQYLIDLAINLKAAKKSGNEKQTLVGKNIALIFEKSSTRTRCAFEVAAFDQ
GAQVTYIGPSGSQIGHKESMKDTARVLGRMYDGIEYRGYGQNIVEELGEFAGVPVWNGLTNEFHPTQILADLMTMLEHAP
GKTLPELSFAYLGDARNNMGNSLMVGAAKMGMDIRLVAPKSFWPDEALVTQCREIASVTGARITLTENVEEGVYDVDFLY
TDVWVSMGEPKEAWAERVSLMTPYQINQQVITATRNPEVKFMHCLPAFHNEHTTVGREIEMAYGLKGLEVTDEVFESAHS
IVFDEAENRMHTIKAVMVATLGD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
argF NP_374285.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 9e-98 59
argF NP_645867.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 6e-98 59
arcB1 YP_186044.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 5e-98 59
argF YP_493760.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 5e-98 59
argF NP_371693.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 9e-98 59
SE0103 NP_763658.1 ornithine carbamoyltransferase Not tested SCCpbp4 Protein 1e-98 58
SAKOR_01090 YP_008491278.1 Ornithine carbamoyltransferase Not tested vSa¥ã Protein 7e-98 58