Gene Information

Name : ECED1_5003 (ECED1_5003)
Accession : YP_002400757.1
Strain : Escherichia coli ED1a
Genome accession: NC_011745
Putative virulence/resistance : Virulence
Product : putative Transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1737
EC number : -
Position : 4951202 - 4952026 bp
Length : 825 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pr : putative regulator

DNA sequence : 
ATGTCAGAAAATGAAAACCTGCTGCTGAGACTGCGCCAGAGCGTTGATGGATATAGTCGAACGCAACAGAAACTGGGAGA
GTTTGTACTTAGCGATCCGGCAAAAGTAGTCTACCTGACGATTACCGAACTGGCGCGTGAAAGCGGTACCAGCGAGGCTA
GCGTCACACGTCTGTGCCGAACGCTGGGGTGTAAGGGCTATAACGAATTCAAAATGGCGCTTGCACTCGATCTCCGACAA
GTACAGTCTGTAGAGCACGGCGGTGATGAGATTGACAATGTGGTCAATGAATCAGTGCAAGCACTACAGGACACAGCAAA
ATTACTCGACAGGACCTTGCTGGAAGCAGCCACGCTTGCACTGCATCAGGCTCAGTCAGTGCAGATTTATGGCGTAGCAG
CCAGTGCTATTCTGGGGGAGTATTTACATTACAAACTCCTGCGTCTGGGGAAACCCGCACAATTGTTCAGCGATATGCAT
CGTGCTGCCATGAACGCCACAACACTTAGTAAAAACACGTTCGTGGTGGCGATTTCCAGTTCTGGATCCACGCGCGATCT
GCTGCATGTCGTAAAACTAGCGCGTAAGCAAGGTGTGCGTGTACTGGCGCTGAGTAATACGCCGCGCAGTCCGTTAGCTT
CGCTGAGTGATATTCAACTGGTCGCGGCCAAACCGGAAGGCCCCTTGAGCGCCGGCGCGCTGAATGCCAAGGTGGGAGTT
ATGCTGTTGGTAGAGTTACTCACCACATCGCTGATTGCGCTGGATCATAAGTACAGCGATGTGAGCCAGCAAACTGCCAG
CGCGACCCTACCGCTACTGCTTTAA

Protein sequence : 
MSENENLLLRLRQSVDGYSRTQQKLGEFVLSDPAKVVYLTITELARESGTSEASVTRLCRTLGCKGYNEFKMALALDLRQ
VQSVEHGGDEIDNVVNESVQALQDTAKLLDRTLLEAATLALHQAQSVQIYGVAASAILGEYLHYKLLRLGKPAQLFSDMH
RAAMNATTLSKNTFVVAISSSGSTRDLLHVVKLARKQGVRVLALSNTPRSPLASLSDIQLVAAKPEGPLSAGALNAKVGV
MLLVELLTTSLIALDHKYSDVSQQTASATLPLLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1775 NP_231410.1 hypothetical protein Not tested VPI-2 Protein 2e-49 44
VC0395_A1373 YP_001217316.1 hypothetical protein Not tested VPI-2 Protein 2e-49 44
VPI2_0023c ACA01840.1 RpiR family transcriptional regulator Not tested VPI-2 Protein 2e-49 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECED1_5003 YP_002400757.1 putative Transcriptional regulator VFG1108 Protein 9e-50 44