Gene Information

Name : ECED1_4984 (ECED1_4984)
Accession : YP_002400742.1
Strain : Escherichia coli ED1a
Genome accession: NC_011745
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4940792 - 4941640 bp
Length : 849 bp
Strand : -
Note : Evidence 4 : Homologs of previously reported genes of unknown function; PubMedId : 9987116

DNA sequence :
ATGTCTGCAATCACAGTCTCCCGTCCGGAAGTGGTCACCGGGCATACGGACGTTATCTGCTCCACCTCAGTCAGTCACAT
TCTGGCTGTGCGAAAGACTACACTGCTGCAAATCGACACACTTATCCGGCAACTGGCTGAAATCTCGGTACTGACAGAAA
GTATTGGAGGTAAAACTGCTCTGGACTGGGCCATGAAACAGGATTTTCGCTGTGGCTGCTGGCTCATGGAGAAACCGGAA
ACCGCAATGAAAGCCATCACCCGCAACCTTGACCGCGAAATCTGGCGTGACCTGATGCAACGTTCCGGGATGCTGTCATT
AATGGATGCGCAGGCCCGTGATACATGGTACCACTCACTGGAGTACGATAACTTTCCGGAAATCAGTGAAGCGAACATTT
GGAGCACATTTGAGCAACTGCACCAGAATAAGGATGAAGTGTTTGAGCGAGGAGTGATCAACGTCTTCAGAGGGCTGAGC
TGGAATTACAAAACCAATTCCCCCTGTAAATTTGGCAGTAAAATTATCGTCAACAACCTGGTGAGGTGGGACAGATGGGG
ATTGCATCTTATCACCGGGCAACAGGCAGATCGACTCGCCGACCTGGAAAGAATGCTATACCTGTTCAGCGGCAAACCGA
TCCCCGACAGCCGGGAAAATATCATCATTCGGCTGGATGATCACATCCGCTCCGTTCAGGGCAAAGTGTGCTATGAAGAT
GAGATGTTCAACATCAGATACTTTAAGAAGGGCTCCGCACACATCACGTTCAGGAAACCAGAACTGGTTGATCGGCTAAA
TGATATTATTGCGAAACATTATGCGGGAAAAGTATCTTCTTCAGTATAG

Protein sequence :
MSAITVSRPEVVTGHTDVICSTSVSHILAVRKTTLLQIDTLIRQLAEISVLTESIGGKTALDWAMKQDFRCGCWLMEKPE
TAMKAITRNLDREIWRDLMQRSGMLSLMDAQARDTWYHSLEYDNFPEISEANIWSTFEQLHQNKDEVFERGVINVFRGLS
WNYKTNSPCKFGSKIIVNNLVRWDRWGLHLITGQQADRLADLERMLYLFSGKPIPDSRENIIIRLDDHIRSVQGKVCYED
EMFNIRYFKKGSAHITFRKPELVDRLNDIIAKHYAGKVSSSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1226 NP_286760.1 hypothetical protein Not tested TAI Protein 1e-119 91
Z1664 NP_287166.1 hypothetical protein Not tested TAI Protein 1e-119 91
unnamed AAL57572.1 unknown Not tested LEE Protein 6e-118 90
z1226 CAD33792.1 Z1226 protein Not tested PAI I 536 Protein 2e-120 90
unnamed CAI43906.1 hypothetical protein Not tested LEE Protein 9e-117 89
ECO103_3595 YP_003223452.1 hypothetical protein Not tested LEE Protein 2e-115 88
unnamed CAE85207.1 hypothetical protein Not tested PAI V 536 Protein 3e-116 88
APECO1_3484 YP_854327.1 hypothetical protein Not tested PAI I APEC-O1 Protein 5e-119 88
ORF_49 AAZ04463.1 hypothetical protein Not tested PAI I APEC-O1 Protein 4e-119 88
ECO111_3781 YP_003236116.1 hypothetical protein Not tested LEE Protein 7e-115 87
aec79 AAW51762.1 Aec79 Not tested AGI-3 Protein 5e-117 87
S3207 NP_838489.1 hypothetical protein Not tested SHI-1 Protein 1e-114 86
unnamed AAK00485.1 unknown Not tested SHI-1 Protein 1e-114 86
SF3002 NP_708776.1 hypothetical protein Not tested SHI-1 Protein 1e-114 86
unnamed CAD66210.1 hypothetical protein Not tested PAI III 536 Protein 4e-106 84

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECED1_4984 YP_002400742.1 hypothetical protein VFG1533 Protein 1e-120 90
ECED1_4984 YP_002400742.1 hypothetical protein VFG0666 Protein 6e-115 86
ECED1_4984 YP_002400742.1 hypothetical protein VFG1685 Protein 2e-106 84