Gene Information

Name : ECED1_4908 (ECED1_4908)
Accession : YP_002400672.1
Strain : Escherichia coli ED1a
Genome accession: NC_011745
Putative virulence/resistance : Unknown
Product : putative transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 4867908 - 4868333 bp
Length : 426 bp
Strand : -
Note : Evidence 4 : Homologs of previously reported genes of unknown function

DNA sequence :
ATGGAACAGAAAATATTATCCGCAGAACCCCGCAGAACATTTTCAAATGAGTTTAAACTTCAAATGGTTAAACTGGCTTC
ACAACTAGGAGCCTCTGTTGCCCGTATTGCCAGGGAACACGATATCAATGATAACCTCCTGTTCAAATGGCTCAGGCTCT
GGCAGAACGAAGGGCGTATATCGCGGCGTCTTCCGGTAACAACCTCTTCTGGCGCTGGCGTTGAATTATTACCTGTTGAG
ATAACGCCTGATGAGCAGAAAGAGCCTATGGCGGCTCTTACTCCGCTTTTATCCACTCCTTCACAAAGCACAGTCAGTGC
CAGTTCCTGTAAAGTTGAGTTCCGCCACGGTAACATGACGCTGGAAAATCCTTCACCAGAGCTGCTCACGGTGTTGATCC
GTGAACTGACCGGGAGGGGGCGATGA

Protein sequence :
MEQKILSAEPRRTFSNEFKLQMVKLASQLGASVARIAREHDINDNLLFKWLRLWQNEGRISRRLPVTTSSGAGVELLPVE
ITPDEQKEPMAALTPLLSTPSQSTVSASSCKVEFRHGNMTLENPSPELLTVLIRELTGRGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1159 NP_286694.1 hypothetical protein Not tested TAI Protein 8e-54 97
Z1598 NP_287102.1 hypothetical protein Not tested TAI Protein 8e-54 97
unnamed CAD66191.1 hypothetical protein Not tested PAI III 536 Protein 2e-49 90
Z1208 NP_286743.1 hypothetical protein Not tested TAI Protein 9e-47 86
Z1648 NP_287151.1 hypothetical protein Not tested TAI Protein 6e-46 85
ECO103_3566 YP_003223429.1 hypothetical protein Not tested LEE Protein 2e-44 80
unnamed CAD66197.1 hypothetical protein Not tested PAI III 536 Protein 9e-37 79
ECUMN_3365 YP_002414038.1 putative transposase Not tested Not named Protein 6e-28 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECED1_4908 YP_002400672.1 putative transposase VFG1666 Protein 7e-50 90
ECED1_4908 YP_002400672.1 putative transposase VFG1672 Protein 4e-37 79
ECED1_4908 YP_002400672.1 putative transposase VFG1738 Protein 2e-28 57