|
Name : ECED1_4893 (ECED1_4893) Accession : YP_002400661.1 Strain : Escherichia coli ED1a Genome accession: NC_011745 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3436 EC number : - Position : 4850810 - 4852453 bp Length : 1644 bp Strand : + Note : Evidence 4 : Homologs of previously reported genes of unknown function DNA sequence : ATGAGTCAGAAATACCTCATTCGCATCGCAGAGCTGGAAAGGTTGCTCTCTGAGCAGGCTGAAGCCCTCCGTCAGAAAGA CCAACAACTGAGTCTGGTTGAAGAGACGGAGGCCTTCCTGCGTTCTGTGCTGGCACGTGCCGAAGAAAAGATCGAAGAAG ATGAACGGGAAATAGAACATCTGCGGGCTCAGATAGAAAAACTGCGCCGGATGCTGTTCGGTACCCGTTCTGAAAAACTG CGTCGTGAAGTTGAACAGGCTGAGGCCCAGCTGAAGCAACGCGAACAGGCTGAGGCCCAGCTGAAGCAACGCGAACAGGA CAGCGATCGTTACAGTGGGCGAGAGGATGACCCGCAGGTTCCCCGCCAGTTGCGACAGTCACGCCATCGTCGTCCGTTAC CGGAGCATCTGCCCCGCGAAATAAACCGCCTGGAGCCTGAAGAAAGCTGTTGCCCGGAGTGTGGCGGTGAGCTGGATTAT CTGGGGGAAGTCAGTGCAGAACAACTGGAACTGGTGAGCAGCGCCCTAAAAGTGATCCGCACAGAACGGGTAAAAAAAGC CTGTACAAAATGTGACTGCATCGTTGAAGCACCGGCACCATCCCGTCCGATAGAGCGTGGTATCGCGGGCCCGGGGTTAC TTGCCCGCGTGTTAACGGGAAAATACTGCGAACATCTGCCACTGTATCGTCAGAGTGAAATCTTTGCCCGCCAGGGTGTC GAACTGAGCCGTGCCTTACTCTCCAACTGGGTTGATGCGTGCTGCCAGTTAATGACTCCGCTGAATGATGCCCTGTACAG TTATGTGATGAACACCCGCAAGGTTCACACTGATGACACACCAGTAAAAGTACTGGCACCGGGCAGGAAGAAGGCGAAAA CAGGATATATCTGGACGTATGTCCGGGATGACCGAAATGCCGGTTCGCCAGAACCTCCGGCGGTCTGGTTCGCCTACTCA CCGGACCATCAGGGTAAACATCCGGAGCAACACCTTCGTCCCTTCCGGGGTATCCTGCAGGCAGATGCGTTCGCAGGTTA CGATCGGCTGTTCAGTGCCGAACGTGAAAGCGGCGCGTTGACGGAAGCAGGATGCTGGGCTCATGCACGGCGCAAAATCC ACGATGTATATATCAGTACCAAAAGCGCGACGGCGGAAGAAGCACTGAAACTAATCGGTGAACTGTACGCCATTGAGCAC GAAATACGCGGGTTGCCGGTGTCTGAACGCCTGGCGGTCAGGCAAATGCAGAGTAAACCGCTACTGACTTCCCTGTATAA GCTGATGCAGGAGAAAGAACACACGTTATCGAAAAAATGCCGTCTGAGAGATGCGTTCCGGTATATCAGGAAGCACTGGA TTGCGTTGTGCAACTTCTGTGATGACGGTCTGGCGGAGGCGGACAATAACACAGCGGAAAGAGCGCTTCGTGCAGTCTGT CTCGGAAAGAAAAATTACGTGCTCTTCGGTAGCGATCACGGCGGCGAGCGTGGTGCACTGCTGTACGGGCTGATCGGCAC CTGCCGTCTGAACGGTATCGATCCGGAAGCGTATCTGCGCCATATTCTGAGCGTACTGCCGGAATGGCCTTCCAACCGAG TTGGCGAACTCCTGCCATGGAACGTAGTACTCACCAATAAATAA Protein sequence : MSQKYLIRIAELERLLSEQAEALRQKDQQLSLVEETEAFLRSVLARAEEKIEEDEREIEHLRAQIEKLRRMLFGTRSEKL RREVEQAEAQLKQREQAEAQLKQREQDSDRYSGREDDPQVPRQLRQSRHRRPLPEHLPREINRLEPEESCCPECGGELDY LGEVSAEQLELVSSALKVIRTERVKKACTKCDCIVEAPAPSRPIERGIAGPGLLARVLTGKYCEHLPLYRQSEIFARQGV ELSRALLSNWVDACCQLMTPLNDALYSYVMNTRKVHTDDTPVKVLAPGRKKAKTGYIWTYVRDDRNAGSPEPPAVWFAYS PDHQGKHPEQHLRPFRGILQADAFAGYDRLFSAERESGALTEAGCWAHARRKIHDVYISTKSATAEEALKLIGELYAIEH EIRGLPVSERLAVRQMQSKPLLTSLYKLMQEKEHTLSKKCRLRDAFRYIRKHWIALCNFCDDGLAEADNNTAERALRAVC LGKKNYVLFGSDHGGERGALLYGLIGTCRLNGIDPEAYLRHILSVLPEWPSNRVGELLPWNVVLTNK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| Z4340 | NP_289564.1 | hypothetical protein | Not tested | OI-122 | Protein | 6e-179 | 89 |
| Z1161 | NP_286696.1 | hypothetical protein | Not tested | TAI | Protein | 0.0 | 89 |
| Z1600 | NP_287104.1 | hypothetical protein | Not tested | TAI | Protein | 0.0 | 89 |
| tnp | AEA34687.1 | IS66 family transposase | Not tested | Not named | Protein | 9e-140 | 85 |
| Z5098 | NP_290249.1 | prophage-associated protein | Not tested | LEE | Protein | 1e-134 | 62 |
| unnamed | CAC39285.1 | hypothetical protein | Not tested | LPA | Protein | 9e-135 | 62 |
| unnamed | AAC31494.1 | L0015 | Not tested | LEE | Protein | 8e-135 | 62 |
| ECs4547 | NP_312574.1 | hypothetical protein | Not tested | LEE | Protein | 7e-134 | 62 |
| Z1131 | NP_286666.1 | hypothetical protein | Not tested | TAI | Protein | 5e-134 | 62 |
| tnp | AEA34686.1 | transposase | Not tested | Not named | Protein | 5e-134 | 62 |
| Z1570 | NP_287074.1 | hypothetical protein | Not tested | TAI | Protein | 5e-134 | 62 |
| unnamed | ACU09439.1 | IS66 family element transposase | Not tested | LEE | Protein | 5e-134 | 62 |
| Z4337 | NP_289562.1 | hypothetical protein | Not tested | OI-122 | Protein | 1e-134 | 62 |
| st57 | CAC81895.1 | ST57 protein | Not tested | LEE II | Protein | 4e-129 | 61 |
| unnamed | CAI43806.1 | hypothetical protein | Not tested | LEE | Protein | 3e-134 | 59 |
| unnamed | AAL57570.1 | unknown | Not tested | LEE | Protein | 8e-135 | 59 |
| aec53 | AAW51736.1 | Aec53 | Not tested | AGI-3 | Protein | 2e-103 | 53 |
| ECO103_3554 | YP_003223421.1 | hypothetical protein | Not tested | LEE | Protein | 2e-90 | 50 |
| Z4317 | NP_289543.1 | hypothetical protein | Not tested | OI-122 | Protein | 2e-90 | 50 |
| BCAM0248 | YP_002232880.1 | putative transposase | Not tested | BcenGI11 | Protein | 8e-96 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ECED1_4893 | YP_002400661.1 | hypothetical protein | VFG1736 | Protein | 0.0 | 97 |
| ECED1_4893 | YP_002400661.1 | hypothetical protein | VFG0793 | Protein | 5e-135 | 62 |
