Gene Information

Name : ECED1_4881 (ECED1_4881)
Accession : YP_002400651.1
Strain : Escherichia coli ED1a
Genome accession: NC_011745
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4841495 - 4842313 bp
Length : 819 bp
Strand : -
Note : Evidence 4 : Homologs of previously reported genes of unknown function

DNA sequence :
ATGCGACTAGCCAGTCGTTTTGGTTATGCGAACCAGATACGCCGTGACCGTCCGCTGACACATGAAGAGCTGATGCACCA
TGTGCCGGGGATTTTCGGGGAAGATAAACACACGTCCCGAAGCCAGAACTATACGTACATCCCCACTATCACCGTACTGG
AAAGCCTGCAGCGGGAAGGTTTTCAGCCCTTTTTCGCCTGCCAGACCCGTGTGCGCGACCCGGGCCGCCGGGGATACACA
AAACACATGCTGCGTCTGCGGCGGGCCGGAGAGATAAACGGAGAACATGTCCCTGAAATTATTCTGCTCAACTCTCATGA
CGGTACCTCCAGCTACCAGATGCTGCCGGGTTACTTCAGGTTCGTCTGCCAGAACGGATGCGTCTGTGGTCAGTCTCTGG
GGGAAGTGCGTGTTCCGCACCGGGGAAATGTGGTGGACAGAGTCATTGAAGGGGCTTACGAGGTGGTGGGCGTGTTTGAC
CGGATTGAGGAAAAGCGTGATGCCATGCAGTCGCTGATTCTGCCGCCACCGGCACGCCAGGCGCTGGCACAGGCGGCACT
GACTTACCGTTATGGTGACGAACATCAGCCCGTCACCACCGCCGACATTCTGACGCCACGACGCCGGGAGGATTACGGTA
AGGACCTGTGGAGTGCTTATCAGACCATTCAGGAGAATATGCTGAAAGGCGGAATTTCAGGTCGCAGCGCTAAAGGAAAA
CGTATCCATACCCGTGCCATTCACAGCATTGACACTGACATTAAGCTCAACCGCGCATTGTGGGTGATGGCGGAAACCCT
GCTGGAGAGCCTGCGCTGA

Protein sequence :
MRLASRFGYANQIRRDRPLTHEELMHHVPGIFGEDKHTSRSQNYTYIPTITVLESLQREGFQPFFACQTRVRDPGRRGYT
KHMLRLRRAGEINGEHVPEIILLNSHDGTSSYQMLPGYFRFVCQNGCVCGQSLGEVRVPHRGNVVDRVIEGAYEVVGVFD
RIEEKRDAMQSLILPPPARQALAQAALTYRYGDEHQPVTTADILTPRRREDYGKDLWSAYQTIQENMLKGGISGRSAKGK
RIHTRAIHSIDTDIKLNRALWVMAETLLESLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAI43843.1 hypothetical protein Not tested LEE Protein 5e-120 99
aec71 AAW51754.1 Aec71 Not tested AGI-3 Protein 5e-120 99
yafZ ADD91704.1 YafZ Not tested PAI-I AL862 Protein 5e-120 99
SF2994 NP_708768.1 hypothetical protein Not tested SHI-1 Protein 1e-119 98
S3199 NP_838482.1 hypothetical protein Not tested SHI-1 Protein 1e-119 98
ECO103_3587 YP_003223444.1 hypothetical protein Not tested LEE Protein 9e-118 96
unnamed CAD66201.1 hypothetical protein Not tested PAI III 536 Protein 6e-117 95
c5156 NP_757004.1 hypothetical protein Not tested PAI II CFT073 Protein 8e-115 94
yafZ YP_854321.1 hypothetical protein Not tested PAI I APEC-O1 Protein 7e-115 94
ORF_47 AAZ04456.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 5e-115 94
Z1215 NP_286750.1 hypothetical protein Not tested TAI Protein 7e-113 92
Z1655 NP_287158.1 hypothetical protein Not tested TAI Protein 7e-113 92
z1215 CAD33785.1 Z1215 protein Not tested PAI I 536 Protein 1e-110 91
unnamed CAD42096.1 hypothetical protein Not tested PAI II 536 Protein 9e-110 90
yafZ CAE85199.1 YafZ protein Not tested PAI V 536 Protein 8e-112 90
ORF SG86 AAN62307.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 9e-72 55
ORF C80 AAN62174.1 conserved hypothetical protein; associated with oriT region on plasmids Not tested PAGI-2(C) Protein 2e-71 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECED1_4881 YP_002400651.1 hypothetical protein VFG0658 Protein 4e-120 98
ECED1_4881 YP_002400651.1 hypothetical protein VFG1676 Protein 3e-117 95
ECED1_4881 YP_002400651.1 hypothetical protein VFG1526 Protein 6e-111 91
ECED1_4881 YP_002400651.1 hypothetical protein VFG1615 Protein 5e-110 90