Gene Information

Name : nlpA (ECED1_4354)
Accession : YP_002400164.1
Strain : Escherichia coli ED1a
Genome accession: NC_011745
Putative virulence/resistance : Unknown
Product : cytoplasmic membrane lipoprotein-28
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1464
EC number : -
Position : 4279743 - 4280561 bp
Length : 819 bp
Strand : -
Note : Evidence 1b : Function experimentally demonstrated in the studied species; PubMedId : 88298691, 89359178, 9914480, 3003106; Product type lp : lipoprotein

DNA sequence :
ATGAAACTGACAACACATCATCTACGGGCGGGGGCCGCATTATTACTGGCAGGAGTTCTGCTGGCAGGTTGCGACCAGAG
CAGCAGCGATGAAAAGCATATTAAAGTTGGCGTTATTAATGGCGCAGAACAAGATGTCGCGGAAGTCGCTAAAAAGGTAG
CAAAAGAGAAATATGGGCTCGATGTTGAACTGGTAGGATTTAGCGGTTCGTTGCTACCGAACGATGCGACAAATCATGGC
GAGCTTGATGCGAACGTCTTCCAGCATCGACCCTTTCTTGAACAAGATAATCAGGCGCATGGTTATAAACTGGTAGCGGT
GGGAAATACGTTTGTCTTCCCCATGGCGGGCTATTCCAAAAAAATCAAAACAGTGGCGCAAATAAAAGAAGGTGCGACAG
TGGCGATCCCCAACGACCCGACTAACCTTGGTCGCGCGCTTTTACTGCTGCAAAAAGAGAAGCTAATTACTCTGAAAGAG
GGAAAAGGGTTATTACCTACCGCGTTGGATATAACCGATAATCCACGCCATTTGCAGATAATGGAGCTGGAAGGGGCACA
GTTGCCACGTGTACTGGACGACCCGAAAGTGGATGTAGCGATTATCAGCACCACTTACATCCAGCAAACAGGACTTTCTC
CGGTTAACGACAGCGTATTTATTGAAGATAAAAATTCGCCGTATGTGAATATTCTGGTGGCACGGGAAGATAATAAGAAT
GCAGAAAACGTGAAGGAATTTCTGCAATCTTATCAATCACCCGAAGTCGCTAAAGCGGCAGAAACCATTTTTAACGGTGG
CGCGGTGCCTGGCTGGTAA

Protein sequence :
MKLTTHHLRAGAALLLAGVLLAGCDQSSSDEKHIKVGVINGAEQDVAEVAKKVAKEKYGLDVELVGFSGSLLPNDATNHG
ELDANVFQHRPFLEQDNQAHGYKLVAVGNTFVFPMAGYSKKIKTVAQIKEGATVAIPNDPTNLGRALLLLQKEKLITLKE
GKGLLPTALDITDNPRHLQIMELEGAQLPRVLDDPKVDVAIISTTYIQQTGLSPVNDSVFIEDKNSPYVNILVAREDNKN
AENVKEFLQSYQSPEVAKAAETIFNGGAVPGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
nlpA AAW51766.1 NlpA Not tested AGI-3 Protein 5e-100 100