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Name : rph (ECED1_4327) Accession : YP_002400139.1 Strain : Escherichia coli ED1a Genome accession: NC_011745 Putative virulence/resistance : Unknown Product : ribonuclease PH Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0689 EC number : 2.7.7.56 Position : 4249998 - 4250738 bp Length : 741 bp Strand : - Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs DNA sequence : TTGTTTCAAGCCGGAGATTTCAATATGCGTCCAGCAGGCCGTAGCAATAATCAGGTGCGTCCCGTTACCCTGACTCGTAA CTATACAAAACATGCAGAAGGCTCGGTGCTGGTCGAATTTGGCGATACCAAAGTATTGTGTACCGCCTCTATTGAAGAAG GCGTGCCGCGCTTCCTGAAAGGTCAGGGCCAGGGTTGGATCACCGCAGAGTACGGTATGCTGCCACGTTCTACCCATACC CGTAACGCGCGTGAAGCGGCGAAAGGTAAGCAGGGTGGACGCACAATGGAAATCCAGCGTCTGATCGCCCGTGCTCTTCG CGCGGCAGTAGATTTGAAAGCACTGGGTGAGTTCACCATTACGCTGGACTGCGACGTGCTTCAGGCTGATGGTGGCACGC GTACCGCTTCGATTACGGGTGCCTGCGTGGCGCTGGCAGATGCGCTACAGAAGCTGGTGGAAAACGGCAAGCTGAAAACT AATCCAATGAAAGGGATGGTAGCCGCGGTCTCTGTCGGGATTGTGAACGGTGAAGCGGTTTGCGATCTGGAATATGTTGA AGACTCTGCCGCAGAGACCGACATGAACGTAGTGATGACCGAAGACGGGCGTATCATTGAAGTGCAGGGGACGGCAGAAG GCGAACCGTTCACCCACGAAGAGTTACTCACCTTGTTGGCGCTGGCCCGAGGGGGAATCGAATCCATTGTAGCGACGCAG AAGGCGGCGCTGGCAAACTGA Protein sequence : MFQAGDFNMRPAGRSNNQVRPVTLTRNYTKHAEGSVLVEFGDTKVLCTASIEEGVPRFLKGQGQGWITAEYGMLPRSTHT RNAREAAKGKQGGRTMEIQRLIARALRAAVDLKALGEFTITLDCDVLQADGGTRTASITGACVALADALQKLVENGKLKT NPMKGMVAAVSVGIVNGEAVCDLEYVEDSAAETDMNVVMTEDGRIIEVQGTAEGEPFTHEELLTLLALARGGIESIVATQ KAALAN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rph | YP_001800860.1 | ribonuclease PH | Not tested | Not named | Protein | 9e-54 | 58 |
