Gene Information

Name : aufB (ECED1_4099)
Accession : YP_002399926.1
Strain : Escherichia coli ED1a
Genome accession: NC_011745
Putative virulence/resistance : Virulence
Product : putative fimbrial chaperone AufB
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 4004345 - 4005124 bp
Length : 780 bp
Strand : -
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 15213132; Product type pf : putative factor

DNA sequence : 
GTGTTATTTCATCAACAAGGATGCTGTATGAAATGTATTATTGGAAATAAAAAATGGGTTTATGGATTCAGGGATGAATT
AAAAGTATCACAAAATATTATACGCTCAGGGATTCTTTTTTTACTATCGATATTATTTATTAATAATGCGTCCGCGGGCG
GGTTTGGCCTTGGCGTAACGCGATTGATTTATCCGGCAGAAAGTAAGCAAATAACACTCAGTGTGCAAAATAGCGGTGAC
AACACCAGTTATTTAATTCAATCATGGGTTGATGACAGTAAAACGGAAAAAAAGAGCCAGGATTTTGTTATCACTCCTCC
CCTCTTTATGTTACCAACGCGTAAAGAAGCTTCATTACGTATCATGTTTCTTGGTAAGACTAATTTGCCGACCGATCGTG
AAACTTTGTATTGGATGAATGTTAAAGCAATTCCGCCAACAGATGAGAAAAATACACAGAAGAATACCTTACAGTTGGCA
TTACAAAACAAAATCAAGCTATTTTATCGCCCGGAAAATCTACCTGTGCAACCAGGAAAAGCACGAAATATGTTGCGGTT
TAAGTATGAGGGCAAACAACTAAAAGTTATCAATCCTTCGCCTTATTACCTGACACTGACAGGAATTAAAGTACAAGGGA
GTAAATTGCCCAATATGTTTGTACCACCGAAAAGTGATATTACGGTCTCGTCGCCAGTGACGTTGGCTGGTGAAATTACT
TATCAAACAATTAATGACTTTGGCGCTACGACGGAGCGGCAGAAAGGAATAATGCAGTAA

Protein sequence : 
MLFHQQGCCMKCIIGNKKWVYGFRDELKVSQNIIRSGILFLLSILFINNASAGGFGLGVTRLIYPAESKQITLSVQNSGD
NTSYLIQSWVDDSKTEKKSQDFVITPPLFMLPTRKEASLRIMFLGKTNLPTDRETLYWMNVKAIPPTDEKNTQKNTLQLA
LQNKIKLFYRPENLPVQPGKARNMLRFKYEGKQLKVINPSPYYLTLTGIKVQGSKLPNMFVPPKSDITVSSPVTLAGEIT
YQTINDFGATTERQKGIMQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 2e-46 47
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 3e-45 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
aufB YP_002399926.1 putative fimbrial chaperone AufB VFG0911 Protein 1e-45 48
aufB YP_002399926.1 putative fimbrial chaperone AufB VFG1644 Protein 2e-45 47
aufB YP_002399926.1 putative fimbrial chaperone AufB VFG0875 Protein 8e-50 46
aufB YP_002399926.1 putative fimbrial chaperone AufB VFG0445 Protein 4e-48 45
aufB YP_002399926.1 putative fimbrial chaperone AufB VFG0455 Protein 4e-37 41